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L3_079_000M1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_63_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1195..2280
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36563.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2423..3886
DNA (1464bp) protein (488aa)
Lysine decarboxylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HED2_9FIRM
Lysine decarboxylase {ECO:0000313|EMBL:CDE36562.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
lysine decarboxylase
L3_079_000M1_scaffold_63_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3865..4479
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36561.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4603..5046
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36560.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5088..6080
DNA (993bp) protein (331aa)
DNA polymerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA46_9FIRM
DNA polymerase {ECO:0000313|EMBL:CDE36559.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA polymerase
L3_079_000M1_scaffold_63_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6159..7073
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36558.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7063..7788
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36557.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7820..8665
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB58_9FIRM
hypothetical protein
L3_079_000M1_scaffold_63_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8742..9575
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
nfo; putative endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAY8_9FIRM
L3_079_000M1_scaffold_63_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9656..10297)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36920.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10508..12640
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36919.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12709..15285
DNA (2577bp) protein (859aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HD77_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDE36918.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
X-X-X-Leu-X-X-Gly heptad repeats
L3_079_000M1_scaffold_63_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15447..15908
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35286.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
conserved exported protein of unknown function
L3_079_000M1_scaffold_63_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15947..16429
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35285.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16459..16905)
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6L5_9FIRM
MarR family transcriptional regulator {ECO:0000313|EMBL:CDE35284.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MarR family transcriptional regulator
L3_079_000M1_scaffold_63_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17006..17134
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35283.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_63_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17237..18250
DNA (1014bp) protein (338aa)
2-dehydro-3-deoxygluconokinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ9_9FIRM
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:CDE35282.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
2-dehydro-3-deoxygluconokinase
L3_079_000M1_scaffold_63_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18348..19187)
DNA (840bp) protein (280aa)
Putative transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N4_9FIRM
Putative transcriptional regulator AraC family {ECO:0000313|EMBL:CDE35281.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
putative alfa-amylase
L3_079_000M1_scaffold_63_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19359..24065
DNA (4707bp) protein (1569aa)
Alpha-L-fucosidase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7E9_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDE35280.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
alpha-L-fucosidase
L3_079_000M1_scaffold_63_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24168..24998
DNA (831bp) protein (277aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6L2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE35279.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_21
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25124..26113
DNA (990bp) protein (330aa)
Lipopolysaccharide cholinephosphotransferase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2Q3_EUBE2
lipopolysaccharide cholinephosphotransferase
Lipopolysaccharide cholinephosphotransferase {ECO:0000313|EMBL:ACR71308.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_079_000M1_scaffold_63_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26370..26582)
DNA (213bp) protein (71aa)
Predicted nucleic acid-binding protein contains PIN domain n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TNF2_9FIRM
Predicted nucleic acid-binding protein, contains PIN domain
Predicted nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:CBK91291.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_63_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26579..26869)
DNA (291bp) protein (97aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R6TI56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC69409.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_63_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27484..30696
DNA (3213bp) protein (1071aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Isoleucine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8J7_9FIRM
ileS; isoleucyl-tRNA synthetase
L3_079_000M1_scaffold_63_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30801..32843
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35277.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_63_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32972..35440
DNA (2469bp) protein (823aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Phosphorylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7N0_9FIRM
starch phosphorylase
L3_079_000M1_scaffold_63_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35608..36576
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35275.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
SpoIID/LytB domain
L3_079_000M1_scaffold_63_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36664..37491
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35274.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_63_29
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37754..39235
DNA (1482bp) protein (494aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=3 Tax=Clostridiales RepID=D4MVZ9_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:EDS21223.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_63_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39258..41147
DNA (1890bp) protein (630aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AP61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89456.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
Displaying items 1-30 of 131 in total

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