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L3_079_000M1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_67_1
unknown

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_079_000M1_scaffold_67_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(809..1231)
DNA (423bp) protein (141aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDD7_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EET61371.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Sigma-70, region 4.
L3_079_000M1_scaffold_67_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1238..2101)
DNA (864bp) protein (288aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9D0_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC15151.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
LPXTG-site transpeptidase (sortase) family protein
L3_079_000M1_scaffold_67_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2172..4070)
DNA (1899bp) protein (633aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H206_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDB30815.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_079_000M1_scaffold_67_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(4083..5396)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30818.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
LPXTG-domain-containing protein cell wall anchor domain
L3_079_000M1_scaffold_67_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5782..6555
DNA (774bp) protein (258aa)
Sensory transduction protein LytT n=3 Tax=Eubacterium RepID=C4ZF59_EUBR3
Response regulator of the LytR/AlgR family
Sensory transduction protein LytT {ECO:0000313|EMBL:CDC74356.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_67_7
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

6552..7850
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N3V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF06727.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_079_000M1_scaffold_67_8
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8106..9617
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IGK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21075.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_079_000M1_scaffold_67_9
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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9751..11049
DNA (1299bp) protein (433aa)
Extracellular solute-binding protein family 1 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAU5_MEISD
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH64319.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
L3_079_000M1_scaffold_67_10
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11073..11927
DNA (855bp) protein (285aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Blautia sp. CAG:37 RepID=R7JU09_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDE67459.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
binding-protein-dependent transport systems inner membrane component
L3_079_000M1_scaffold_67_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11937..12809
DNA (873bp) protein (291aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPT3_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDA78713.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
binding-protein-dependent transport systems inner membrane component
L3_079_000M1_scaffold_67_12
unknown

Not on your lists

12817..13218
DNA (402bp) protein (134aa)

This feature has no annotations

L3_079_000M1_scaffold_67_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14052..14774
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33497.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Response regulator of the LytR/AlgR family
L3_079_000M1_scaffold_67_14
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14875..15507)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9K5_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50793.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L3_079_000M1_scaffold_67_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15482..16135)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MMP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90964.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
antibiotic transport system ATP-binding protein
L3_079_000M1_scaffold_67_16
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16158..17015)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1Y1L4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:ERI06107.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
hypothetical protein
L3_079_000M1_scaffold_67_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17005..17889)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00036A2302
Uncharacterized protein {ECO:0000313|EMBL:CCY90968.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000M1_scaffold_67_18
unknown

Not on your lists

comp(17903..18736)
DNA (834bp) protein (278aa)

This feature has no annotations

L3_079_000M1_scaffold_67_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(19150..19350)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72535.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_079_000M1_scaffold_67_20
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19434..19841
DNA (408bp) protein (136aa)
cell division protein Fic n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003804CA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57211.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_079_000M1_scaffold_67_21
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20401..20784
DNA (384bp) protein (128aa)
Manganese containing catalase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U559_ETHHY
manganese containing catalase
Manganese containing catalase {ECO:0000313|EMBL:ADU27872.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_079_000M1_scaffold_67_22
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21121..22314
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7M6Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96819.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_079_000M1_scaffold_67_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22316..24961
DNA (2646bp) protein (882aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B1M3_9FIRM
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQJ55184.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_079_000M1_scaffold_67_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24965..25396
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BI26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32864.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
GNAT family acetyltransferase
L3_079_000M1_scaffold_67_25
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25549..26031)
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium sp. CAG:448 RepID=R6T1R1_9CLOT
ybaK/ebsC protein
L3_079_000M1_scaffold_67_26
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(26028..26624)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LJ83_9BACL
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
L3_079_000M1_scaffold_67_27
unknown

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26790..26945
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_000M1_scaffold_67_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27025..28440)
DNA (1416bp) protein (472aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CBL14839.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL14839.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL14839.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBL14839.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5E4_9FIRM
L3_079_000M1_scaffold_67_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28443..29285)
DNA (843bp) protein (281aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1Z4_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CCX82837.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L3_079_000M1_scaffold_67_30
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(29549..30766)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U5F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77289.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Alcohol dehydrogenase, class IV
Displaying items 1-30 of 115 in total

View Taxonomy