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L3_079_000M1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_76_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(241..2463)
DNA (2223bp) protein (741aa)
Putative alpha-1 2-mannosidase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2F6_9PORP
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD13314.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_079_000M1_scaffold_76_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2560..3435)
DNA (876bp) protein (292aa)
Sec-independent protein translocase protein TatC n=4 Tax=Parabacteroides RepID=A7AGG1_9PORP
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Sec-independent protein translocase
L3_079_000M1_scaffold_76_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3439..3633)
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=7 Tax=Parabacteroides RepID=A7AGG0_9PORP
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Sec-independent protein translocase
L3_079_000M1_scaffold_76_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3775..4656
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Parabacteroides RepID=A7AGF8_9PORP
malonyl CoA-acyl carrier protein transacylase
L3_079_000M1_scaffold_76_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4733..6652)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AF88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15106.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6744..9917)
DNA (3174bp) protein (1058aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BDI6_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD15107.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10067..10450
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15108.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
starch-binding protein
L3_079_000M1_scaffold_76_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10540..10692)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A3V6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15109.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_76_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11652..14873
DNA (3222bp) protein (1074aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides merdae RepID=K6C097_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13575.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative outer membrane protein probably involved in nutrient binding
L3_079_000M1_scaffold_76_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14890..16653
DNA (1764bp) protein (588aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB68_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13576.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17190..18188)
DNA (999bp) protein (333aa)
Peptidase, M28 family n=2 Tax=Parabacteroides merdae RepID=A7AGE6_9PORP
Peptidase, M28 family {ECO:0000313|EMBL:EDN86202.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminopeptidase
L3_079_000M1_scaffold_76_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18452..18610)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18798..19340)
DNA (543bp) protein (181aa)
Carbonate dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X393_9PORP
Carbonate dehydratase {ECO:0000313|EMBL:CDD13579.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carbonic anhydrase
L3_079_000M1_scaffold_76_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19372..20148)
DNA (777bp) protein (259aa)
Cof-like hydrolase n=3 Tax=Parabacteroides RepID=A7AGE3_9PORP
Cof-like hydrolase {ECO:0000313|EMBL:CDD13580.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20259..21434
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86197.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000M1_scaffold_76_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21544..22590)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_000M1_scaffold_76_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22666..23328)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZYK4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08503.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
metal dependent phosphohydrolase
L3_079_000M1_scaffold_76_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23539..27087)
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Parabacteroides RepID=A7AGD6_9PORP
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_079_000M1_scaffold_76_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27118..28296)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13585.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_76_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28453..29472)
DNA (1020bp) protein (340aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB75_9PORP
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:CDD13586.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_76_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30035..30985
DNA (951bp) protein (317aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Methylenetetrahydrofolate reductase n=3 Tax=Parabacteroides RepID=A7AGD1_9PORP
5,10-methylenetetrahydrofolate reductase
L3_079_000M1_scaffold_76_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31070..32113)
DNA (1044bp) protein (348aa)
L-asparaginase, type I n=2 Tax=Parabacteroides RepID=K5ZSB7_9PORP
L-asparaginase, type I {ECO:0000313|EMBL:EKN14411.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L-asparaginase I
L3_079_000M1_scaffold_76_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32346..32528
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YKV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14412.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_079_000M1_scaffold_76_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32592..33716
DNA (1125bp) protein (375aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13590.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase III subunit delta
L3_079_000M1_scaffold_76_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33732..35006)
DNA (1275bp) protein (425aa)
MATE efflux family protein n=2 Tax=Parabacteroides johnsonii RepID=B7BAJ5_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EEC96551.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
multidrug efflux pump BexA
L3_079_000M1_scaffold_76_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35150..36148
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DAD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77175.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_079_000M1_scaffold_76_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36242..37858)
DNA (1617bp) protein (539aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQM0_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD13593.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_76_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38331..39488)
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=2 Tax=Parabacteroides RepID=K6AJB0_9PORP
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chaperone protein DnaJ
L3_079_000M1_scaffold_76_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39531..40124)
DNA (594bp) protein (198aa)
Protein GrpE n=2 Tax=Parabacteroides RepID=K5YPC3_9PORP
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
molecular chaperon GrpE protein
L3_079_000M1_scaffold_76_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40366..41784
DNA (1419bp) protein (473aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZWH0_9PORP
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:CDD13596.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
PDZ domain-containing protein
Displaying items 1-30 of 97 in total

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