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L3_079_000M1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_102_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..1017)
DNA (1017bp) protein (339aa)
UPI0003D605A1 related cluster n=2 Tax=unknown RepID=UPI0003D605A1
Uncharacterized protein {ECO:0000313|EMBL:ETI98196.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
restriction modification system DNA specificity domain-containing protein
L3_079_000M1_scaffold_102_2
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1014..2534)
DNA (1521bp) protein (507aa)
N-6 DNA Methylase {ECO:0000313|EMBL:EFZ34432.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EFZ34432.1};; TaxID=525362 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis ATCC 25644.;"
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
N-6 DNA Methylase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=E7FR45_9LACO
L3_079_000M1_scaffold_102_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2538..4871)
DNA (2334bp) protein (778aa)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases {ECO:0000313|EMBL:CBK78468.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBK78468.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL94_CLOSC
L3_079_000M1_scaffold_102_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(5566..6243)
DNA (678bp) protein (226aa)
deaminase-reductase domain-containing protein (EC:1.1.1.193)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4I2_9FIRM
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:CCX73709.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_079_000M1_scaffold_102_5
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6282..7277)
DNA (996bp) protein (332aa)
alpha/beta hydrolase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B331C7
Alpha/beta hydrolase {ECO:0000313|EMBL:EWM52193.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Hydrolases of the alpha/beta superfamily
L3_079_000M1_scaffold_102_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7352..8416)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61799.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_079_000M1_scaffold_102_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8473..9276)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C7N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14577.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_079_000M1_scaffold_102_8
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9281..10141)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4C7P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86373.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Protein of unknown function (DUF3737).
L3_079_000M1_scaffold_102_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10169..10402)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30503.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_079_000M1_scaffold_102_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10437..11192)
DNA (756bp) protein (252aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4U5_9CLOT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEG72713.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
short-chain alcohol dehydrogenase-like protein
L3_079_000M1_scaffold_102_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11350..12249
DNA (900bp) protein (300aa)
Transcriptional regulator LysR family n=1 Tax=Clostridium sp. CAG:149 RepID=R5MM71_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCY86381.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
LysR family transcriptional regulator
L3_079_000M1_scaffold_102_12
unknown

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12568..12864
DNA (297bp) protein (99aa)

This feature has no annotations

L3_079_000M1_scaffold_102_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13724..14488)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QYA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62578.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14726..15772
DNA (1047bp) protein (349aa)
ApbE family protein n=2 Tax=Oscillibacter RepID=U2R247_9FIRM
ApbE family protein {ECO:0000313|EMBL:ERK62579.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
apbE; thiamine biosynthesis lipoprotein ApbE precursor
L3_079_000M1_scaffold_102_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15750..16163
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QI59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62580.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16173..16688
DNA (516bp) protein (172aa)
Heptaprenyl diphosphate synthase component I n=2 Tax=Oscillibacter RepID=U2QE81_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:ERK62581.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16693..17784
DNA (1092bp) protein (364aa)
Putative stage V sporulation protein K n=2 Tax=Oscillibacter RepID=U2QYA2_9FIRM
Putative stage V sporulation protein K {ECO:0000313|EMBL:ERK62582.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
spoVK; putative stage V sporulation protein K
L3_079_000M1_scaffold_102_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17781..18770
DNA (990bp) protein (330aa)
putative D-specific D-2-hydroxyacid dehydrogenase (EC:1.1.1.-)
Putative glyoxylate reductase n=2 Tax=Oscillibacter RepID=U2S679_9FIRM
Putative glyoxylate reductase {ECO:0000313|EMBL:ERK62583.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_102_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18814..19209
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R252_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62584.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19206..19421
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QI65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62585.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_21
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19418..19918
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUM7_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00470.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_079_000M1_scaffold_102_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19980..22040)
DNA (2061bp) protein (687aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QY97_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK62587.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC transporter
L3_079_000M1_scaffold_102_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22030..23772)
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2S674_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK62588.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_102_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23843..24274)
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=2 Tax=Oscillibacter RepID=U2R256_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK62589.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulatory protein
L3_079_000M1_scaffold_102_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24455..24994)
DNA (540bp) protein (180aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Oscillibacter RepID=U2QI68_9FIRM
L3_079_000M1_scaffold_102_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25179..27377)
DNA (2199bp) protein (733aa)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Oscillibacter RepID=U2QE71_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ERK62591.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
anaerobic ribonucleoside triphosphate reductase
L3_079_000M1_scaffold_102_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27593..27931)
DNA (339bp) protein (113aa)
MazG nucleotide pyrophosphohydrolase domain protein n=2 Tax=Oscillibacter RepID=U2QY92_9FIRM
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:ERK62592.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_102_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27964..29004)
DNA (1041bp) protein (347aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Oscillibacter RepID=U2S671_9FIRM
S-adenosyl-methyltransferase MraW {ECO:0000313|EMBL:ERK62593.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_102_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29127..29591
DNA (465bp) protein (155aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2SEP1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK62518.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative Xre family DNA-binding protein
L3_079_000M1_scaffold_102_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29774..29989
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QE67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62520.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Displaying items 1-30 of 112 in total

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