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L3_079_000M1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_132_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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215..1669
DNA (1455bp) protein (485aa)
Uncharacterized protein n=7 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZIV4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11401.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
transposase is4 family protein
L3_079_000M1_scaffold_132_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2107..2769)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AF79_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13308.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_132_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2766..4568)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YKT2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14382.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000M1_scaffold_132_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4645..6345)
DNA (1701bp) protein (567aa)
ATP-dependent DNA helicase, RecQ family n=2 Tax=Parabacteroides merdae RepID=A7AGH3_9PORP
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EDN86229.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP-dependent DNA helicase RecQ
L3_079_000M1_scaffold_132_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6355..8079)
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Parabacteroides merdae RepID=A7AGH4_9PORP
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDN86230.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
single-stranded-DNA-specific exonuclease RecJ
L3_079_000M1_scaffold_132_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8479..9624
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86232.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
PD-(D/E)XK nuclease superfamily
L3_079_000M1_scaffold_132_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9611..10174
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XA95_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13276.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_132_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10875..11435
DNA (561bp) protein (187aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Parabacteroides RepID=A7AGH9_9PORP
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CDD13274.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
translation factor
L3_079_000M1_scaffold_132_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11438..12838
DNA (1401bp) protein (467aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BCW2_9PORP
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDD13273.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase
L3_079_000M1_scaffold_132_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12872..14680
DNA (1809bp) protein (603aa)
Chloride transporter, ClC family n=3 Tax=Parabacteroides RepID=A7AGI1_9PORP
Chloride transporter ClC family {ECO:0000313|EMBL:CDD13272.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chloride channel protein
L3_079_000M1_scaffold_132_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14684..15658
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=3 Tax=Parabacteroides RepID=A7AGI2_9PORP
L3_079_000M1_scaffold_132_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15781..18903)
DNA (3123bp) protein (1041aa)
RND transporter HAE1 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVB5_9PORP
RND transporter HAE1 family {ECO:0000313|EMBL:CDD13270.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux pump
L3_079_000M1_scaffold_132_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18910..20025)
DNA (1116bp) protein (372aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2A3_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD13269.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux pump
L3_079_000M1_scaffold_132_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20052..21455)
DNA (1404bp) protein (468aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAP7_9PORP
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EEC96485.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
outer membrane efflux protein oprM
L3_079_000M1_scaffold_132_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21587..21988
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Parabacteroides RepID=A7AGI6_9PORP
peptidyl-prolyl cis-trans isomerase
L3_079_000M1_scaffold_132_16
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21943..23442)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DFU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77644.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
MATE efflux family protein
L3_079_000M1_scaffold_132_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23479..25764)
DNA (2286bp) protein (762aa)
malic enzyme (EC:1.1.1.40)
Phosphate acetyl/butyryl transferase n=5 Tax=Parabacteroides RepID=A7AGI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08170.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_079_000M1_scaffold_132_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26014..26172)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86246.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_000M1_scaffold_132_19
unknown

Not on your lists

comp(26390..26491)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BCV3_9PORP
L3_079_000M1_scaffold_132_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26539..28842
DNA (2304bp) protein (768aa)
TonB-dependent receptor n=2 Tax=Parabacteroides merdae RepID=A7AGJ2_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN86248.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent outer membrane receptor
L3_079_000M1_scaffold_132_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28961..29143)
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13261.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_132_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29400..29996)
DNA (597bp) protein (199aa)
Probable GTP-binding protein EngB n=3 Tax=Parabacteroides RepID=A7AGJ5_9PORP
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
engB; ribosome biogenesis GTP-binding protein YsxC
L3_079_000M1_scaffold_132_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30062..31543)
DNA (1482bp) protein (494aa)
Transporter SSS family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X291_9PORP
Transporter SSS family {ECO:0000313|EMBL:CDD13259.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/solute symporter
L3_079_000M1_scaffold_132_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31843..33156)
DNA (1314bp) protein (438aa)
SpoIID/LytB domain-containing protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFC1_9PORP
SpoIID/LytB domain-containing protein {ECO:0000313|EMBL:EKN14364.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000M1_scaffold_132_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33228..35228)
DNA (2001bp) protein (667aa)
Oligopeptide transporter, OPT family n=3 Tax=Parabacteroides RepID=A7AGK0_9PORP
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EDN86256.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
oligopeptide transporter
L3_079_000M1_scaffold_132_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35488..36111
DNA (624bp) protein (208aa)
Recombination protein RecR n=2 Tax=Parabacteroides RepID=K5YKR8_9PORP
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
recR; recombination protein RecR
L3_079_000M1_scaffold_132_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36161..37318
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZS73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14361.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycosyl transferase family protein
L3_079_000M1_scaffold_132_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37376..37909
DNA (534bp) protein (178aa)
Acetyltransferase GNAT family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPN5_9PORP
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDD13253.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyltransferase
L3_079_000M1_scaffold_132_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37946..38542)
DNA (597bp) protein (199aa)
UPF0301 protein HMPREF1060_01036 n=2 Tax=Parabacteroides RepID=K5ZFB6_9PORP
UPF0301 protein BN675_01741 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_079_000M1_scaffold_132_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38664..39977)
DNA (1314bp) protein (438aa)
Aminotransferase, class I/II n=3 Tax=Parabacteroides RepID=A7AGK6_9PORP
Aminotransferase, class I/II {ECO:0000313|EMBL:EDN86262.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aspartate aminotransferase
Displaying items 1-30 of 77 in total

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