ggKbase home page

L3_079_000M1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_135_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

245..808
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61196.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_2
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(867..1598)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61195.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_3
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1630..1839)
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK72_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA61194.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_4
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2010..3659)
DNA (1650bp) protein (550aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic diphosphatase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAI5_9CLOT
Inorganic diphosphatase {ECO:0000313|EMBL:CDA61193.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4143..5639
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C712_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61192.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
ABC transporter
L3_079_000M1_scaffold_135_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5721..6614
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61191.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_7
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6793..8115
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative two-component histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD83_9CLOT
L3_079_000M1_scaffold_135_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8112..8987
DNA (876bp) protein (292aa)
YcbB domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK68_9CLOT
YcbB domain protein {ECO:0000313|EMBL:CDA61189.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative two-component response regulator
L3_079_000M1_scaffold_135_9
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9373..10443
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61188.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10533..11612)
DNA (1080bp) protein (360aa)
chitinase (EC:3.2.1.14)
Glycoside hydrolase family 18 protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C708_9CLOT
Glycoside hydrolase family 18 protein {ECO:0000313|EMBL:CDA61187.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_11
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11609..12508)
DNA (900bp) protein (300aa)
8-oxoguanine DNA glycosylase N-terminal domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ24_9CLOT
8-oxoguanine DNA glycosylase N-terminal domain protein {ECO:0000313|EMBL:CDA61186.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
8-oxoguanine DNA glycosylase
L3_079_000M1_scaffold_135_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12580..13143
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61185.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
transcriptional regulator
L3_079_000M1_scaffold_135_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13273..16083)
DNA (2811bp) protein (937aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61184.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_14
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16120..16905)
DNA (786bp) protein (262aa)
yacO; putative TrmH family tRNA/rRNA methyltransferase YacO (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3R4_9CLOT
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDA79654.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_079_000M1_scaffold_135_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17074..17349)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61181.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_16
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17959..19857
DNA (1899bp) protein (633aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD73_9CLOT
Chaperone protein HtpG {ECO:0000256|SAAS:SAAS00218406}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Heat shock protein Hsp90-like protein
L3_079_000M1_scaffold_135_17
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19893..20636
DNA (744bp) protein (248aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK60_9CLOT
L3_079_000M1_scaffold_135_18
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20829..21050
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61178.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_135_19
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21406..24153
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:169 RepID=R6C6Z8_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
secA; Protein translocase subunit SecA
L3_079_000M1_scaffold_135_20
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24284..26188
DNA (1905bp) protein (635aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
fructose-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ15_9CLOT
L3_079_000M1_scaffold_135_21
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26253..27386)
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD68_9CLOT
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CDA61175.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_22
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27387..28589)
DNA (1203bp) protein (401aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK57_9CLOT
Saccharopine dehydrogenase {ECO:0000313|EMBL:CDA61174.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_23
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28619..29473)
DNA (855bp) protein (285aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAG6_9CLOT
Agmatinase {ECO:0000313|EMBL:CDA61173.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_24
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29463..30314)
DNA (852bp) protein (284aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Clostridium sp. CAG:169 RepID=R6C6Z3_9CLOT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_25
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30319..31776)
DNA (1458bp) protein (486aa)
arginine decarboxylase (EC:4.1.1.18 4.1.1.19)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61171.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L3_079_000M1_scaffold_135_26
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31835..32593)
DNA (759bp) protein (253aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium sp. CAG:169 RepID=R6BD63_9CLOT
L3_079_000M1_scaffold_135_27
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33136..33597)
DNA (462bp) protein (154aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK52_9CLOT
L3_079_000M1_scaffold_135_28
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33611..34297)
DNA (687bp) protein (229aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase (EC:3.2.2.16)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAG1_9CLOT
L3_079_000M1_scaffold_135_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34449..35639)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C6Y9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61167.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
conserved hypothetical protein
L3_079_000M1_scaffold_135_30
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35796..36710
DNA (915bp) protein (305aa)
LysR substrate binding domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ06_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:CDA61166.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
LysR family transcriptional regulator
Displaying items 1-30 of 82 in total

View Taxonomy