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L3_079_000M1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_165_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(266..964)
DNA (699bp) protein (233aa)
Putative membrane protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z6_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDM50240.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_165_2
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(983..1699)
DNA (717bp) protein (239aa)
Radical SAM domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z5_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDM50239.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_165_3
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1860..5672)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z4_9FIRM
DNA-directed RNA polymerase subunit beta'
L3_079_000M1_scaffold_165_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5693..9523)
DNA (3831bp) protein (1277aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=5 Tax=root RepID=A5Z8Z3_9FIRM
L3_079_000M1_scaffold_165_5
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9888..10253)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z2_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L12P
L3_079_000M1_scaffold_165_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10352..10846)
DNA (495bp) protein (165aa)
50S ribosomal protein L10 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z1_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L10P
L3_079_000M1_scaffold_165_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11116..11820)
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Z0_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ribosomal protein L1, bacterial/chloroplast
L3_079_000M1_scaffold_165_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11880..12305)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Y9_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L11P
L3_079_000M1_scaffold_165_9

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comp(12425..12943)
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=3 Tax=root RepID=A5Z8Y8_9FIRM
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EKC81545.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NusG antitermination factor
L3_079_000M1_scaffold_165_10

Not on your lists

comp(12968..13177)
DNA (210bp) protein (70aa)
Protein translocase subunit SecE n=2 Tax=root RepID=A5Z8Y7_9FIRM
SecE subunit of protein translocation complex {ECO:0000313|EMBL:EKC69265.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
protein translocase subunit secE/sec61 gamma
L3_079_000M1_scaffold_165_11
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13202..13351)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Eubacterium RepID=R5LAJ2_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
50S ribosomal protein L33
L3_079_000M1_scaffold_165_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13534..14241)
DNA (708bp) protein (236aa)
ComF family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z850_9FIRM
ComF family protein {ECO:0000313|EMBL:EDM50573.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Predicted amidophosphoribosyltransferases
L3_079_000M1_scaffold_165_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14256..16508)
DNA (2253bp) protein (751aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Helicase, RecD/TraA family n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z851_9FIRM
helicase, RecD/TraA family
L3_079_000M1_scaffold_165_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16738..17739)
DNA (1002bp) protein (334aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z852_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EDM50575.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
rod shape-determining protein MreB
L3_079_000M1_scaffold_165_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18166..18420)
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=2 Tax=root RepID=A5Z853_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EDM50576.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Stage III sporulation protein D.
L3_079_000M1_scaffold_165_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18469..18915)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z854_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50577.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_165_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18920..20698)
DNA (1779bp) protein (593aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=2 Tax=root RepID=A5Z855_9FIRM
Creatinase {ECO:0000313|EMBL:EDM50578.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_165_18
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20721..21263)
DNA (543bp) protein (181aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z856_9FIRM
L3_079_000M1_scaffold_165_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21379..22023)
DNA (645bp) protein (215aa)
Conserved domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z857_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDM50580.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
histidine kinase
L3_079_000M1_scaffold_165_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22025..22522)
DNA (498bp) protein (166aa)
Transcription elongation factor GreA n=2 Tax=root RepID=A5Z858_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Transcription elongation factor
L3_079_000M1_scaffold_165_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22836..24236)
DNA (1401bp) protein (467aa)
Citrate synthase (si) (EC:2.3.3.1)
Citrate synthase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z859_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_165_22
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24283..25161)
DNA (879bp) protein (293aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EDM50583.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDM50583.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
dgkB; diacylglycerol kinase (EC:2.7.1.107)
Lipid kinase, YegS/Rv2252/BmrU family n=2 Tax=root RepID=A5Z860_9FIRM
L3_079_000M1_scaffold_165_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25431..26669)
DNA (1239bp) protein (413aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z861_9FIRM
L3_079_000M1_scaffold_165_24
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26750..27535)
DNA (786bp) protein (262aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
proB; Glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z862_9FIRM
L3_079_000M1_scaffold_165_25
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27864..28748)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z863_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50586.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_165_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29073..29282)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z864_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50588.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_165_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29397..30257)
DNA (861bp) protein (287aa)
Abi-like protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z866_9FIRM
Abi-like protein {ECO:0000313|EMBL:EDM50589.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Abortive infection bacteriophage resistance protein
L3_079_000M1_scaffold_165_28
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30315..31115)
DNA (801bp) protein (267aa)
Fibronectin type III domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z867_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDM50590.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Leucine-rich repeat (LRR) protein
L3_079_000M1_scaffold_165_29
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31131..33227)
DNA (2097bp) protein (699aa)
RHS repeat-associated core domain protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z7K4_9FIRM
RHS repeat-associated core domain protein {ECO:0000313|EMBL:CDA30086.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L3_079_000M1_scaffold_165_30
unknown

Not on your lists

comp(34480..34620)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying items 1-30 of 88 in total

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