ggKbase home page

L3_079_000M1_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_180_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1021)
DNA (1020bp) protein (340aa)
Cna protein B-type domain protein n=2 Tax=Oscillibacter RepID=U2S2N7_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:ERK62667.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1255..2808)
DNA (1554bp) protein (518aa)
Cna protein B-type domain protein n=2 Tax=Oscillibacter RepID=U2S2N7_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:ERK62667.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2872..3651)
DNA (780bp) protein (260aa)
Sortase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ38_9FIRM
Sortase {ECO:0000313|EMBL:EHO27634.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_000M1_scaffold_180_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3658..4548)
DNA (891bp) protein (297aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ39_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EHO27635.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_000M1_scaffold_180_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4795..5760)
DNA (966bp) protein (322aa)
ParB-like partition protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ40_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EHO27636.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ParB-like partition proteins
L3_079_000M1_scaffold_180_6
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5714..6541)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65749.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ATPases involved in chromosome partitioning
L3_079_000M1_scaffold_180_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6641..7015)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65748.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_079_000M1_scaffold_180_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7676..8842)
DNA (1167bp) protein (389aa)
4-phosphoerythronate dehydrogenase n=2 Tax=Oscillibacter RepID=U2QBV0_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERK61113.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative oxidoreductase
L3_079_000M1_scaffold_180_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9556..11379
DNA (1824bp) protein (608aa)
GTP-binding protein TypA n=2 Tax=Oscillibacter RepID=U2QB19_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:ERK61116.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
typA; GTP-binding protein TypA
L3_079_000M1_scaffold_180_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11814..12788
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2S7H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58767.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative surface layer protein
L3_079_000M1_scaffold_180_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

12899..13393
DNA (495bp) protein (165aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9G1_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_000M1_scaffold_180_12
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13377..14072
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y626_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CQR51560.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L3_079_000M1_scaffold_180_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14171..15529
DNA (1359bp) protein (453aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
fumC; fumarate hydratase class II (EC:4.2.1.2)
Fumarate hydratase class II n=2 Tax=Oscillibacter RepID=U2QQI2_9FIRM
L3_079_000M1_scaffold_180_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15780..16214)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2S7R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58857.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_180_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16498..17718
DNA (1221bp) protein (407aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Oscillibacter RepID=U2Q7U5_9FIRM
L3_079_000M1_scaffold_180_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17946..19334
DNA (1389bp) protein (463aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Oscillibacter RepID=U2QRL4_9FIRM
L3_079_000M1_scaffold_180_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19398..20339
DNA (942bp) protein (314aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Oscillibacter RepID=U2RZA1_9FIRM
hypothetical protein
L3_079_000M1_scaffold_180_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20431..21657
DNA (1227bp) protein (409aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Oscillibacter RepID=U2R2R5_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_180_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21840..22700
DNA (861bp) protein (287aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=2 Tax=Oscillibacter RepID=U2QJS9_9FIRM
L3_079_000M1_scaffold_180_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22705..23883
DNA (1179bp) protein (393aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=2 Tax=Oscillibacter RepID=U2Q7U2_9FIRM
L3_079_000M1_scaffold_180_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24093..25076
DNA (984bp) protein (328aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Oscillibacter RepID=U2QRK8_9FIRM
L3_079_000M1_scaffold_180_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25129..26466)
DNA (1338bp) protein (446aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2S7Q6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58847.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26696..27718
DNA (1023bp) protein (341aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=2 Tax=Oscillibacter RepID=U2QQR8_9FIRM
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:ERK58846.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27776..29248
DNA (1473bp) protein (491aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Oscillibacter RepID=U2Q7T7_9FIRM
L3_079_000M1_scaffold_180_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29281..29538)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M740_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66516.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
DNA-binding transcriptional regulator
L3_079_000M1_scaffold_180_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29631..29936
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MF81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66517.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_079_000M1_scaffold_180_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30168..30434
DNA (267bp) protein (89aa)
Putative iron-only hydrogenase system regulator n=2 Tax=Oscillibacter RepID=U2QJ22_9FIRM
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:ERK58843.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30446..31480
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QQR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58841.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_180_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31551..32315
DNA (765bp) protein (255aa)
ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2Q7T3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERK58840.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative ABC transporter permease protein
L3_079_000M1_scaffold_180_30
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32315..32878
DNA (564bp) protein (188aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TL34_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC74123.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 88 in total

View Taxonomy