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L3_079_000M1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_182_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NY65_9BACE
collagen-binding protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY83568.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_182_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(142..426)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLU2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04909.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_182_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(475..1029)
DNA (555bp) protein (185aa)
ECF-type sigma factor n=6 Tax=Bacteroides RepID=A6L4E4_BACV8
ECF-type sigma factor
ECF-type sigma factor {ECO:0000313|EMBL:EFV68585.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_182_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1216..4302)
DNA (3087bp) protein (1029aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB08_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16945.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_000M1_scaffold_182_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4304..5986)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NZT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04906.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
polysaccharide lyase 1
L3_079_000M1_scaffold_182_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6186..6818)
DNA (633bp) protein (211aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L4E1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS45050.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_182_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6879..8612)
DNA (1734bp) protein (578aa)
Polysaccharide lyase family 1, candidate pectate lyase n=6 Tax=Bacteroides RepID=A6L4E0_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EOS04904.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
polysaccharide lyase 1, pectate lyase
L3_079_000M1_scaffold_182_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8781..10790)
DNA (2010bp) protein (670aa)
SusD family protein n=6 Tax=root RepID=C6Z907_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04903.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_182_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10811..14266)
DNA (3456bp) protein (1152aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLJ4_BACVU
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS45053.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_182_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14296..15180)
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L4D7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17627.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_182_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15346..19749)
DNA (4404bp) protein (1468aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UMA9_BACVU
Response regulator {ECO:0000313|EMBL:KDS45055.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_079_000M1_scaffold_182_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19875..22499)
DNA (2625bp) protein (875aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB16_BACVU
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFG16953.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L3_079_000M1_scaffold_182_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23762..24724
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLG9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04898.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_182_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24942..25847)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L4D0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40544.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_182_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26207..28336
DNA (2130bp) protein (710aa)
Tex-like protein N-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z917_9BACE
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:EFV68569.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_182_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28359..29156
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9ULN3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY83581.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
NADH pyrophosphatase
L3_079_000M1_scaffold_182_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29233..30894
DNA (1662bp) protein (554aa)
TrkA C-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z919_9BACE
Membrane protein {ECO:0000313|EMBL:EFV68567.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_079_000M1_scaffold_182_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30904..32904
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Fructose-1,6-bisphosphatase class 3 n=4 Tax=Bacteroides RepID=C6Z920_9BACE
fructose-1,6-bisphosphatase
L3_079_000M1_scaffold_182_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33034..33384)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aspartate 1-decarboxylase n=14 Tax=Bacteroides RepID=PAND_BACV8
aspartate decarboxylase
L3_079_000M1_scaffold_182_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33406..34254)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pantothenate synthetase n=12 Tax=Bacteroides RepID=PANC_BACV8
pantoate--beta-alanine ligase
L3_079_000M1_scaffold_182_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34608..35432
DNA (825bp) protein (275aa)
Glycosyltransferase family 5 n=7 Tax=Bacteroides RepID=A6L4C2_BACV8
glycosyl transferase family protein
Starch synthase catalytic domain protein {ECO:0000313|EMBL:KDS32413.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000M1_scaffold_182_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35452..36882
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLH4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS45068.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_182_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37132..37509)
DNA (378bp) protein (126aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6L4C0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO44065.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L3_079_000M1_scaffold_182_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37663..38787
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=A6L4B9_BACV8
DNA polymerase III subunit beta
L3_079_000M1_scaffold_182_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38839..39615
DNA (777bp) protein (259aa)
DNA Pol III epsilon chain n=13 Tax=Bacteroides RepID=A6L4B8_BACV8
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:KDS45071.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_182_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39612..40808
DNA (1197bp) protein (399aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EET17388.2}; EC=4.1.1.36 {ECO:0000313|EMBL:EET17388.2};; EC=6.3.2.5 {ECO:0000313|EMBL:EET17388.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=5 Tax=root RepID=C6Z929_9BACE
flavoprotein
L3_079_000M1_scaffold_182_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40924..42585
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Bacteroides RepID=A6L4B6_BACV8
DNA repair protein recN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000M1_scaffold_182_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42636..43403
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bacteroides vulgatus RepID=D4V9F5_BACVU
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EOS04876.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA/rRNA methyltransferase
L3_079_000M1_scaffold_182_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43440..45140
DNA (1701bp) protein (567aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V9F4_BACVU
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KDS32404.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_000M1_scaffold_182_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45279..46583)
DNA (1305bp) protein (435aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLQ9_BACVU
tRNA(Ile)-lysidine synthetase
Displaying items 1-30 of 113 in total

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