ggKbase home page

L3_079_000M1_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_213_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(389..1561)
DNA (1173bp) protein (391aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H971_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35846.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_213_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1562..2434)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35845.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Protein of unknown function (DUF3737).
L3_079_000M1_scaffold_213_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2609..4360)
DNA (1752bp) protein (584aa)
Dihydroxy-acid dehydratase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H858_9FIRM
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:CDE35844.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
dihydroxy-acid dehydratase
L3_079_000M1_scaffold_213_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4667..6127)
DNA (1461bp) protein (487aa)
Gluconate transporter n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA76_9FIRM
Gluconate transporter {ECO:0000313|EMBL:CDE35843.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
gluconate transporter
L3_079_000M1_scaffold_213_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6391..7122)
DNA (732bp) protein (244aa)
Transcriptional regulator GntR family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCC5_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDE35842.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional regulator, GntR family
L3_079_000M1_scaffold_213_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7263..8552)
DNA (1290bp) protein (430aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H966_9FIRM
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDE35841.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L3_079_000M1_scaffold_213_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8558..8992)
DNA (435bp) protein (145aa)
5-methylcytosine restriction system component-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V394_9FIRM
5-methylcytosine restriction system component-like protein {ECO:0000313|EMBL:CCZ77866.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
McrBC 5-methylcytosine restriction system component
L3_079_000M1_scaffold_213_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9250..9816)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35838.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_213_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9883..9987)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35837.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ORF6N domain.
L3_079_000M1_scaffold_213_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10025..10390)
DNA (366bp) protein (122aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H962_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDE35836.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Helix-turn-helix.
L3_079_000M1_scaffold_213_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10612..11922)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35835.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
dctM; putative TRAP C4-dicarboxylate transport system permease
L3_079_000M1_scaffold_213_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11919..12404)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H849_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35834.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
L3_079_000M1_scaffold_213_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12404..13432)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35833.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
L3_079_000M1_scaffold_213_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13706..14539)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35832.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two component transcriptional regulator, AraC family
L3_079_000M1_scaffold_213_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14560..16041)
DNA (1482bp) protein (494aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H958_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35831.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_213_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16044..17060)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35830.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_079_000M1_scaffold_213_17
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17320..18669)
DNA (1350bp) protein (450aa)
Predicted ATPase related to phosphate starvation-inducible protein PhoH n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZPY6_9FIRM
Predicted ATPase related to phosphate starvation-inducible protein PhoH {ECO:0000313|EMBL:CDA40910.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Predicted ATPase related to phosphate starvation-inducible protein PhoH
L3_079_000M1_scaffold_213_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18700..19359)
DNA (660bp) protein (220aa)
Uncharacterized domain HDIG n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H948_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDE35826.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
uncharacterized domain HDIG
L3_079_000M1_scaffold_213_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19710..20159
DNA (450bp) protein (150aa)
Transcriptional regulator MerR family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8X7_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDE35825.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted transcriptional regulators
L3_079_000M1_scaffold_213_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20203..21282)
DNA (1080bp) protein (360aa)
Fic family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H841_9FIRM
Fic family protein {ECO:0000313|EMBL:CDE35824.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_213_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21474..21740)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35823.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_213_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21755..22459
DNA (705bp) protein (235aa)
Transcriptional regulator LuxR family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCA6_9FIRM
Transcriptional regulator LuxR family protein {ECO:0000313|EMBL:CDE35822.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional regulator, LuxR family protein
L3_079_000M1_scaffold_213_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22469..23287)
DNA (819bp) protein (273aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H945_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:CDE35821.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Na/Pi-cotransporter
L3_079_000M1_scaffold_213_24
unknown

Not on your lists

comp(23368..23721)
DNA (354bp) protein (118aa)

This feature has no annotations

L3_079_000M1_scaffold_213_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23687..24526)
DNA (840bp) protein (280aa)
EDD domain protein DegV family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H838_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDE35819.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
EDD domain protein, DegV family
L3_079_000M1_scaffold_213_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24619..25020)
DNA (402bp) protein (134aa)
Two-component hybrid sensor kinase/response regulator n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA57_9FIRM
Two-component hybrid sensor kinase/response regulator {ECO:0000313|EMBL:CDE35818.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
signal transduction histidine kinase
L3_079_000M1_scaffold_213_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25032..28238)
DNA (3207bp) protein (1069aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1 4-alpha-glucan branching enzyme n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCA2_9FIRM
L3_079_000M1_scaffold_213_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28391..30997
DNA (2607bp) protein (869aa)
Alcohol dehydrogenase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H941_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
L3_079_000M1_scaffold_213_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31063..31818
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35815.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_213_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31908..33983)
DNA (2076bp) protein (692aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H833_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDE35814.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
Displaying items 1-30 of 69 in total

View Taxonomy