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L3_079_000M1_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_258_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..502)
DNA (501bp) protein (167aa)
fumB; fumarate hydratase, class I (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB3_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EHL67168.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_079_000M1_scaffold_258_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(502..1344)
DNA (843bp) protein (281aa)
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB4_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EHL67169.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
L3_079_000M1_scaffold_258_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1341..2516)
DNA (1176bp) protein (392aa)
Malic enzyme (EC:1.1.1.38)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB5_9FIRM
Malate dehydrogenase {ECO:0000313|EMBL:KJF38422.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_079_000M1_scaffold_258_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2749..3900
DNA (1152bp) protein (384aa)
Trigger factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB6_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
trigger factor
L3_079_000M1_scaffold_258_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4157..4510
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67172.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, ArsR family
L3_079_000M1_scaffold_258_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4538..5194
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67173.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5549..6613)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67174.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6613..8073)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67175.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type uncharacterized transport system.
L3_079_000M1_scaffold_258_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8091..8954)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67176.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8951..10060)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67177.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type multidrug transport system, ATPase component
L3_079_000M1_scaffold_258_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10240..10575
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67178.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_079_000M1_scaffold_258_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10629..11234)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67179.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_258_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11231..12004)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67180.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11994..13064)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67181.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13182..13934
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67182.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_079_000M1_scaffold_258_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13924..14196
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67183.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14238..16481)
DNA (2244bp) protein (748aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38416.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
peptidase M56 BlaR1
L3_079_000M1_scaffold_258_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16481..16867)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67186.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator
L3_079_000M1_scaffold_258_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17014..17610)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67187.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_079_000M1_scaffold_258_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17638..18186)
DNA (549bp) protein (183aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD3_9FIRM
putative 5-formyltetrahydrofolate cyclo-ligase family protein
L3_079_000M1_scaffold_258_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18209..20041)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD4_9FIRM
Glycosyltransferase {ECO:0000313|EMBL:KJF38420.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Predicted glycosyltransferases
L3_079_000M1_scaffold_258_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20283..22151)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD5_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:KJF38421.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Predicted glycosyltransferases
L3_079_000M1_scaffold_258_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22377..23162)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66958.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_079_000M1_scaffold_258_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23177..23995)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD8_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_079_000M1_scaffold_258_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24002..24574)
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD9_9FIRM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHL66960.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_079_000M1_scaffold_258_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24766..25512)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66961.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Membrane proteins related to metalloendopeptidases
L3_079_000M1_scaffold_258_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25788..26717
DNA (930bp) protein (310aa)
pscK; pseudouridine kinase (EC:2.7.1.-)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66962.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_079_000M1_scaffold_258_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26714..27631
DNA (918bp) protein (306aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE2_9FIRM
Indigoidine synthase A family protein
L3_079_000M1_scaffold_258_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27683..29071
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66964.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_079_000M1_scaffold_258_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29096..29569
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66965.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying items 1-30 of 69 in total

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