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L3_079_000M1_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_269_1
unknown

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comp(3..74)
DNA (72bp) protein (24aa)
DNA gyrase subunit A (EC:5.99.1.3)
L3_079_000M1_scaffold_269_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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481..3006
DNA (2526bp) protein (842aa)
ATP-dependent Clp protease n=2 Tax=Bacteroides RepID=Q8A9B7_BACTN
ATP-dependent Clp protease
ATP-dependent Clp protease {ECO:0000313|EMBL:AAO76005.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_269_3
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3146..5191
DNA (2046bp) protein (682aa)
Chaperone protein HtpG n=2 Tax=Bacteroides RepID=HTPG_BACTN
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
heat shock protein 90
L3_079_000M1_scaffold_269_4
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5361..7661
DNA (2301bp) protein (767aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IG29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES70427.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
patatin-like phospholipase
L3_079_000M1_scaffold_269_5
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8546..9439)
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
4-hydroxy-tetrahydrodipicolinate synthase n=5 Tax=Bacteroides RepID=Q8A9C0_BACTN
dihydrodipicolinate synthase
L3_079_000M1_scaffold_269_6
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9499..11499)
DNA (2001bp) protein (667aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
DNA ligase n=2 Tax=Bacteroides RepID=DNLJ_BACTN
DNA ligase
L3_079_000M1_scaffold_269_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11576..12253
DNA (678bp) protein (226aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Bacteroides RepID=TRMD_BACTN
L3_079_000M1_scaffold_269_8
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12321..12428)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=I0PZR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC72972.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_269_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12472..13383)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Short=DHOD B;; Short=DHODase B;; Short=DHOdehase B;; EC=1.3.1.14;; Dihydroorotate oxidase B; Orotate reductase (NADH); TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit n=2 Tax=Bacteroides RepID=PYRDB_BACTN
dihydroorotate dehydrogenase 1B
L3_079_000M1_scaffold_269_10
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13371..14147)
DNA (777bp) protein (259aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=3 Tax=Bacteroides RepID=Q8A9C4_BACTN
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_269_11
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14223..14693)
DNA (471bp) protein (157aa)
DNA-binding protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IDG1_9BACE
hypothetical protein
Putative DNA-binding protein {ECO:0000313|EMBL:AAO75997.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_269_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15282..15371)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HD91_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS02023.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_269_13
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15922..16941)
DNA (1020bp) protein (340aa)
DNA polymerase III-like, delta subunit n=2 Tax=Bacteroides RepID=Q8A9C6_BACTN
hypothetical protein
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EES70434.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_269_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16967..17743)
DNA (777bp) protein (259aa)
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=5 Tax=Bacteroides RepID=Q8A9C7_BACTN
AMP nucleosidase {ECO:0000313|EMBL:AAO75995.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_269_15
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17807..18256
DNA (450bp) protein (150aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A9C8_BACTN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI04662.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_079_000M1_scaffold_269_16
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18380..21526)
DNA (3147bp) protein (1049aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=2 Tax=Bacteroides RepID=C6IG39_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EES70437.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
cation efflux pump
L3_079_000M1_scaffold_269_17
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21609..22718)
DNA (1110bp) protein (370aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=C6IG40_9BACE
Cation efflux pump {ECO:0000313|EMBL:CDE80187.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
cation efflux pump
L3_079_000M1_scaffold_269_18
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22752..24149)
DNA (1398bp) protein (466aa)
Outer membrane efflux protein oprM n=3 Tax=Bacteroides RepID=Q8A9D1_BACTN
outer membrane efflux protein oprM
Outer membrane efflux protein oprM {ECO:0000313|EMBL:CDE80184.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_269_19
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24287..25117)
DNA (831bp) protein (277aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A9D2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE80183.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_269_20
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25123..26217)
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Putative GTP cyclohydrolase 1 type 2 n=3 Tax=Bacteroides RepID=Q8A9D3_BACTN
hypothetical protein
L3_079_000M1_scaffold_269_21
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26324..26740
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A9D4_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE80181.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_269_22
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26775..27053)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A9D5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO75987.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_269_23
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27050..27844)
DNA (795bp) protein (265aa)
ABC transporter permease n=1 Tax=Bacteroides faecis RepID=UPI000262D898
TIGR00245 family protein {ECO:0000313|EMBL:EES70444.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
putative ABC transport system, membrane protein
L3_079_000M1_scaffold_269_24
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27879..28499)
DNA (621bp) protein (207aa)
ABC transporter, ATP-binding protein n=5 Tax=Bacteroides RepID=Q8A9D7_BACTN
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS02011.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_269_25
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28586..29128
DNA (543bp) protein (181aa)
Ferredoxin domain containing protein n=4 Tax=Bacteroides RepID=Q8A9D8_BACTN
ferredoxin domain-containing protein
Ferredoxin domain containing protein {ECO:0000313|EMBL:EFI04653.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_079_000M1_scaffold_269_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29199..30314
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IG49_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES70447.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_269_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30351..31235
DNA (885bp) protein (295aa)
Beta-ureidopropionase n=3 Tax=Bacteroides RepID=Q8A9E0_BACTN
beta-ureidopropionase
Beta-ureidopropionase {ECO:0000313|EMBL:AAO75982.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_269_28
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31337..31726)
DNA (390bp) protein (130aa)
Membrane protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UWL7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES70449.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_269_29
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31723..33660)
DNA (1938bp) protein (646aa)
Membrane protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KWQ7_9BACE
Membrane protein {ECO:0000313|EMBL:CDE80173.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
sulfatase
L3_079_000M1_scaffold_269_30
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33664..35427)
DNA (1764bp) protein (588aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=3 Tax=Bacteroides RepID=SYD_BACTN
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EOS02005.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Displaying items 1-30 of 51 in total

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