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L3_079_000M1_scaffold_288

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Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_288_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163..1563)
DNA (1401bp) protein (467aa)
Transporter, major facilitator family protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKQ3_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDK25004.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Sugar phosphate permease
L3_079_000M1_scaffold_288_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1615..2301)
DNA (687bp) protein (229aa)
Putative ribulose-phosphate 3-epimerase n=3 Tax=Lachnospiraceae RepID=A5KKQ4_9FIRM
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EDK25005.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Pentose-5-phosphate-3-epimerase
L3_079_000M1_scaffold_288_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2319..3425)
DNA (1107bp) protein (369aa)
GroES-like protein n=4 Tax=Clostridiales RepID=A5KKQ5_9FIRM
GroES-like protein {ECO:0000313|EMBL:EDK25006.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_079_000M1_scaffold_288_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3831..4775)
DNA (945bp) protein (315aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=4 Tax=Clostridiales RepID=A5KKQ6_9FIRM
Glucokinase {ECO:0000313|EMBL:EFV19484.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_288_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4801..5730)
DNA (930bp) protein (310aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase n=5 Tax=Clostridiales RepID=A5KKQ7_9FIRM
L3_079_000M1_scaffold_288_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5820..7673)
DNA (1854bp) protein (618aa)
UvrABC system protein C n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AXN0_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
excinuclease ABC, C subunit
L3_079_000M1_scaffold_288_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7747..8265)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QH21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25599.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
6-O-methylguanine DNA methyltransferase
L3_079_000M1_scaffold_288_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8409..10436)
DNA (2028bp) protein (676aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Clostridiales RepID=A5KKR0_9FIRM
L3_079_000M1_scaffold_288_9
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10645..12114
DNA (1470bp) protein (490aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82494.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_288_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12206..13141)
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridiales RepID=F3AXN4_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
L3_079_000M1_scaffold_288_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13292..15013
DNA (1722bp) protein (574aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QA84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82496.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_288_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15090..15827)
DNA (738bp) protein (246aa)
RNA polymerase sigma factor n=5 Tax=Clostridiales RepID=A5KKR6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
RNA polymerase, sigma 29 subunit, SigE
L3_079_000M1_scaffold_288_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15924..16742)
DNA (819bp) protein (273aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QAJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25593.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Sporulation factor SpoIIGA.
L3_079_000M1_scaffold_288_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16930..18123)
DNA (1194bp) protein (398aa)
Cell division protein FtsZ n=5 Tax=Clostridiales RepID=E5XGX6_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
cell division protein FtsZ
L3_079_000M1_scaffold_288_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18283..19026)
DNA (744bp) protein (248aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=A5KKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25591.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_288_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19027..20133)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QA80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25590.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Bacterial cell division membrane protein
L3_079_000M1_scaffold_288_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20147..21511)
DNA (1365bp) protein (455aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKS1_9FIRM
L3_079_000M1_scaffold_288_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21514..22470)
DNA (957bp) protein (319aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=6 Tax=Clostridiales RepID=A5KKS2_9FIRM
L3_079_000M1_scaffold_288_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22518..24263)
DNA (1746bp) protein (582aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=4 Tax=Clostridiales RepID=A5KKS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25587.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_288_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24326..26332)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QTP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25586.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_079_000M1_scaffold_288_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26343..26894)
DNA (552bp) protein (184aa)
Conserved domain protein n=4 Tax=Clostridiales RepID=A5KKS6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDK25027.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_079_000M1_scaffold_288_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26979..27914)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=4 Tax=Clostridiales RepID=E5XGW8_9FIRM
L3_079_000M1_scaffold_288_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27928..28365)
DNA (438bp) protein (146aa)
Protein MraZ n=5 Tax=Clostridiales RepID=A5KKS8_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
mraZ protein
L3_079_000M1_scaffold_288_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28689..28940)
DNA (252bp) protein (84aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19464.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000M1_scaffold_288_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29000..29845)
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=5 Tax=Clostridiales RepID=A5KKT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25581.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
EDD domain protein, DegV family
L3_079_000M1_scaffold_288_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29951..31318)
DNA (1368bp) protein (456aa)
Cell division protein FtsW n=5 Tax=Clostridiales RepID=E5XGW4_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:CCZ25580.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Bacterial cell division membrane protein
L3_079_000M1_scaffold_288_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31431..33314)
DNA (1884bp) protein (628aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Clostridiales RepID=A5KKT2_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CCZ25579.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_288_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33740..34003
DNA (264bp) protein (88aa)
Conserved domain protein n=5 Tax=Clostridiales RepID=A5KKT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82067.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_288_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34000..34359
DNA (360bp) protein (120aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QXX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25577.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_288_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34363..34575
DNA (213bp) protein (71aa)
CotJC protein n=4 Tax=Clostridiales RepID=E5XGW0_9FIRM
CotJC protein {ECO:0000313|EMBL:EFV19458.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Mn-containing catalase
Displaying items 1-30 of 90 in total

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