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L3_079_000M1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_293_1
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(260..514)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XGW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14813.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L3_079_000M1_scaffold_293_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

701..1555
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13536.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
MoxR-like ATPases
L3_079_000M1_scaffold_293_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

1560..3296
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YD58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13537.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
nitric oxide reductase activation protein-like protein
L3_079_000M1_scaffold_293_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3346..4254)
DNA (909bp) protein (303aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVZ9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB42167.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Transcriptional regulator
L3_079_000M1_scaffold_293_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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4591..5955
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46466.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Citrate transporter
L3_079_000M1_scaffold_293_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

5983..6582
DNA (600bp) protein (200aa)
Putative cytidylate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ02_9FIRM
Putative cytidylate kinase {ECO:0000313|EMBL:CCZ46465.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
cytidylate kinase
L3_079_000M1_scaffold_293_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6823..8229
DNA (1407bp) protein (469aa)
Putative efflux protein MATE family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GHL3_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB24938.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_293_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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8226..8813
DNA (588bp) protein (196aa)
Cytidylate kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQ08_9FIRM
Cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:CBL42893.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_293_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8858..10009)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27237.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_079_000M1_scaffold_293_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10468..11751
DNA (1284bp) protein (428aa)
Transporter, CPA2 family n=2 Tax=Oscillibacter RepID=U2Q701_9FIRM
Transporter, CPA2 family {ECO:0000313|EMBL:ERK65397.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
sodium/hydrogen exchanger family protein
L3_079_000M1_scaffold_293_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11814..12881)
DNA (1068bp) protein (356aa)
Threonine aldolase (EC:4.1.2.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39537.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_079_000M1_scaffold_293_12
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13009..13893
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2WBR0_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:ERL22126.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
hypothetical protein
L3_079_000M1_scaffold_293_13
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13964..15346
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W7E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD02679.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_079_000M1_scaffold_293_14
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15411..16241)
DNA (831bp) protein (277aa)
EDD domain protein, DegV family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NNC0_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEF95283.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein
L3_079_000M1_scaffold_293_15
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16417..16965
DNA (549bp) protein (183aa)
BS_ykrK family protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BE33_9CLOT
hypothetical protein
BS_ykrK family protein {ECO:0000313|EMBL:CDA51637.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_079_000M1_scaffold_293_16
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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16962..17534
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PVF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL67300.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
L3_079_000M1_scaffold_293_17
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17701..18903
DNA (1203bp) protein (401aa)
Sodium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A497_9CLOT
Sodium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CCX37915.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L3_079_000M1_scaffold_293_18

Not on your lists

comp(18957..19511)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H199_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AHF24968.1}; TaxID=1393498 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1753.;"
Protein of unknown function (DUF1393).
L3_079_000M1_scaffold_293_19

Not on your lists

comp(19508..19930)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AHF24640.1}; TaxID=1393547 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig27.;"
hypothetical protein
L3_079_000M1_scaffold_293_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20216..21286
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M743_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66663.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
uridine kinase
L3_079_000M1_scaffold_293_21
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21283..22338)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JPL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64802.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
conserved membrane protein of unknown function
L3_079_000M1_scaffold_293_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22458..23306
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76566.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysR family transcriptional regulator
L3_079_000M1_scaffold_293_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

23433..26294
DNA (2862bp) protein (954aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0L5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA82208.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L3_079_000M1_scaffold_293_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26294..26638
DNA (345bp) protein (115aa)
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression) n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H045_9FIRM
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression) {ECO:0000313|EMBL:CDB27344.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L3_079_000M1_scaffold_293_25
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26635..27306
DNA (672bp) protein (224aa)
Hydrogenase accessory protein HypB n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GDM1_9FIRM
hydrogenase nickel incorporation protein HypB
Hydrogenase nickel incorporation protein HypB {ECO:0000313|EMBL:AHF06448.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
L3_079_000M1_scaffold_293_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27350..27820)
DNA (471bp) protein (157aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S4N2_9FIRM
hypothetical protein
L3_079_000M1_scaffold_293_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27826..29121)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SM37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45972.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Imidazolonepropionase and related amidohydrolases
L3_079_000M1_scaffold_293_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(29142..30398)
DNA (1257bp) protein (419aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AR20_9FIRM
L3_079_000M1_scaffold_293_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(30395..31234)
DNA (840bp) protein (280aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S610_9FIRM
L3_079_000M1_scaffold_293_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(31358..32254)
DNA (897bp) protein (299aa)
Transcriptional regulator LysR family n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWT2_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ45680.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
transcriptional regulator, LysR family
Displaying items 1-30 of 62 in total

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