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L3_079_000M1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_301_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78187.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(378..1136)
DNA (759bp) protein (253aa)
ATP-dependent transcriptional regulator MalT-like LuxR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIT6_9FIRM
ATP-dependent transcriptional regulator MalT-like LuxR family {ECO:0000313|EMBL:CCZ78188.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LuxR family ATP-dependent transcriptional regulator
L3_079_000M1_scaffold_301_3
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1494..2507)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24112.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
cell adhesion domain-containing protein
L3_079_000M1_scaffold_301_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2596..3354)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78190.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_079_000M1_scaffold_301_5
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3492..3737)
DNA (246bp) protein (82aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUE8_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDF42177.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Fur family ferric uptake regulator protein
L3_079_000M1_scaffold_301_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..5951)
DNA (2196bp) protein (732aa)
Ferrous iron transport protein B n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD17_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CCZ78657.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferrous iron transport protein B
L3_079_000M1_scaffold_301_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6075..6296)
DNA (222bp) protein (74aa)
FeoA domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK33_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CCZ78658.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
FeoA family protein
L3_079_000M1_scaffold_301_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6310..6522)
DNA (213bp) protein (71aa)
Protein probably involved in Fe2+ transport n=1 Tax=Roseburia sp. CAG:18 RepID=R5USE7_9FIRM
Protein probably involved in Fe2+ transport {ECO:0000313|EMBL:CCZ78659.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Fe2+ transport system protein A
L3_079_000M1_scaffold_301_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6706..7137)
DNA (432bp) protein (144aa)
Flavodoxin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKW0_9FIRM
Flavodoxin {ECO:0000313|EMBL:CCZ78660.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flavodoxin, short chain
L3_079_000M1_scaffold_301_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7166..7804)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78661.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7905..8813)
DNA (909bp) protein (303aa)
LysR family Bacterial regulatory helix-turn-helix protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD20_9FIRM
LysR family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:CCZ78662.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulator
L3_079_000M1_scaffold_301_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8825..10129)
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphomethylpyrimidine synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK38_9FIRM
thiamine biosynthesis protein ThiC
L3_079_000M1_scaffold_301_13
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10467..12083
DNA (1617bp) protein (539aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXI9_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDF41990.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
two-component system PleD-like family response regulator
L3_079_000M1_scaffold_301_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12074..14077)
DNA (2004bp) protein (668aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKW5_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCZ78665.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L3_079_000M1_scaffold_301_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14215..14913)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78666.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14939..16468)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78667.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16560..17903)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78668.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18043..18900)
DNA (858bp) protein (286aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
NAD(+) diphosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5USF8_9FIRM
NAD(+) diphosphatase {ECO:0000313|EMBL:CCZ78669.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_301_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19078..20409
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78670.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Na+-driven multidrug efflux pump
L3_079_000M1_scaffold_301_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20400..22520)
DNA (2121bp) protein (707aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T4E7_ROSHA
Uncharacterized protein {ECO:0000313|EMBL:AEN97752.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
hypothetical protein
L3_079_000M1_scaffold_301_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22528..23238)
DNA (711bp) protein (237aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD40_9FIRM
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CCZ78687.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Short-chain dehydrogenases of various substrate specificities
L3_079_000M1_scaffold_301_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23231..24262)
DNA (1032bp) protein (344aa)
Photoproduct lyase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK62_9FIRM
Photoproduct lyase {ECO:0000313|EMBL:CCZ78688.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24234..25157)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78689.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
spore photoproduct
L3_079_000M1_scaffold_301_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25154..26533)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78690.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized FAD-dependent dehydrogenases
L3_079_000M1_scaffold_301_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26554..28554)
DNA (2001bp) protein (667aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFL7_9FIRM
L3_079_000M1_scaffold_301_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28664..29857)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VD42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78692.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29805..31628)
DNA (1824bp) protein (608aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK67_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CCZ78693.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L3_079_000M1_scaffold_301_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31591..31722)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78694.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_301_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31747..32382)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78695.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_301_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32382..32771)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78696.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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