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L3_079_000M1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_323_1
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7..798)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DUB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83830.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Protein of unknown function (DUF3169).
L3_079_000M1_scaffold_323_2
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(791..1006)
DNA (216bp) protein (72aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E4Y3_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CCX83832.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Predicted transcriptional regulators
L3_079_000M1_scaffold_323_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1328..1537)
DNA (210bp) protein (70aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDV6_9FIRM
Methylglyoxal synthase {ECO:0000313|EMBL:CDE36372.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_323_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1561..2613)
DNA (1053bp) protein (351aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBN6_9FIRM
L3_079_000M1_scaffold_323_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2623..3450)
DNA (828bp) protein (276aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHR9_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU98619.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
transcriptional regulator, AraC family
L3_079_000M1_scaffold_323_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3488..3706)
DNA (219bp) protein (73aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZH84_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDB16035.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_079_000M1_scaffold_323_7
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3727..5004)
DNA (1278bp) protein (426aa)
GHMP kinase N-terminal domain protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AD89_9FIRM
GHMP kinase N-terminal domain protein {ECO:0000313|EMBL:CDA39057.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
galactokinase
L3_079_000M1_scaffold_323_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5031..5984)
DNA (954bp) protein (318aa)
Beta galactosidase small chain. (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613, ECO:0000313|EMBL:CBL10016.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Beta galactosidase small chain n=4 Tax=Lachnospiraceae RepID=D4KT14_9FIRM
L3_079_000M1_scaffold_323_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5968..7869)
DNA (1902bp) protein (634aa)
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL10015.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CBL10015.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=3 Tax=Roseburia intestinalis RepID=D4KT13_9FIRM
L3_079_000M1_scaffold_323_10
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7935..9305)
DNA (1371bp) protein (457aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Lachnospiraceae RepID=D4KT12_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF68510.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_079_000M1_scaffold_323_11
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9522..10379
DNA (858bp) protein (286aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:45 RepID=R6NN42_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC13623.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
AraC-type DNA-binding domain-containing proteins
L3_079_000M1_scaffold_323_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10715..12346)
DNA (1632bp) protein (544aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Glycoside Hydrolase Family 77 candidate 4-a-glucanotransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HG67_9FIRM
glycoside hydrolase family 77 protein
L3_079_000M1_scaffold_323_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12382..12849)
DNA (468bp) protein (156aa)
Purine-binding chemotaxis protein CheW n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCZ4_9FIRM
Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CDE37196.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
purine-binding chemotaxis protein CheW
L3_079_000M1_scaffold_323_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12929..14047)
DNA (1119bp) protein (373aa)
Peptide chain release factor 2 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCS8_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
peptide chain release factor RF-2
L3_079_000M1_scaffold_323_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14071..16638)
DNA (2568bp) protein (856aa)
Protein translocase subunit SecA n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC29_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
preprotein translocase subunit SecA
L3_079_000M1_scaffold_323_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16904..17434)
DNA (531bp) protein (177aa)
Putative sigma-54 modulation protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE15_9FIRM
Putative sigma-54 modulation protein {ECO:0000313|EMBL:CDE37193.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
sigma-54 modulation protein
L3_079_000M1_scaffold_323_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18113..18841
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HG62_9FIRM
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDE37192.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
3-oxoacyl-ACP reductase
L3_079_000M1_scaffold_323_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18843..20048)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37191.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_323_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20266..21714
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37190.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_323_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21857..23008)
DNA (1152bp) protein (384aa)
Spore maturation protein CgeB n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC25_9FIRM
Spore maturation protein CgeB {ECO:0000313|EMBL:CDE37189.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
spore maturation protein CgeB
L3_079_000M1_scaffold_323_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23061..24062)
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE10_9FIRM
L3_079_000M1_scaffold_323_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24064..25878)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HG56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37187.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_323_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25881..27608)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37186.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_323_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28057..28950
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37185.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
LysR family transcriptional regulator
L3_079_000M1_scaffold_323_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28961..29734)
DNA (774bp) protein (258aa)
Methyltransferase domain protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC17_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDE37184.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_079_000M1_scaffold_323_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29763..31013)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HE05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37183.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Hemolysins and related proteins containing CBS domains
L3_079_000M1_scaffold_323_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31257..32555)
DNA (1299bp) protein (433aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HG52_9FIRM
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:CDE37182.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_079_000M1_scaffold_323_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32749..33573)
DNA (825bp) protein (275aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCX8_9FIRM
L3_079_000M1_scaffold_323_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33598..34164)
DNA (567bp) protein (189aa)
ThiW protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCR3_9FIRM
ThiW protein {ECO:0000313|EMBL:CDE37180.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
thiW; thiW protein
L3_079_000M1_scaffold_323_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34464..35789
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37179.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MATE family multidrug resistance protein
Displaying items 1-30 of 50 in total

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