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L3_079_000M1_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_328_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

661..927
DNA (267bp) protein (89aa)
Ferrous iron transport protein B n=2 Tax=root RepID=R5B7D6_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CCX47356.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ferrous iron transport protein B
L3_079_000M1_scaffold_328_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

924..2912
DNA (1989bp) protein (663aa)
Ferrous iron transport protein B n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B332_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CCX47357.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
feoB1; Ferrous iron transport protein B
L3_079_000M1_scaffold_328_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

3266..3646
DNA (381bp) protein (127aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RY87_9FIRM
Sporulation transcriptional activator Spo0A {ECO:0000313|EMBL:CCZ46180.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_079_000M1_scaffold_328_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4090..4779)
DNA (690bp) protein (230aa)
Polysaccharide deacetylase family sporulation protein PdaB n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YE64_9FIRM
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:ESL13887.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
polysaccharide deacetylase
L3_079_000M1_scaffold_328_5
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4852..5709)
DNA (858bp) protein (286aa)
Arginine ABC transporter, periplasmic arginine-binding protein ArtP family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D2N3_9FIRM
Arginine-binding extracellular protein ArtP {ECO:0000313|EMBL:KDR94385.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
artP2; amino acid ABC transporter substrate-binding protein, PAAT family
L3_079_000M1_scaffold_328_6
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5731..6762)
DNA (1032bp) protein (344aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase {ECO:0000313|EMBL:CCP27382.1}; EC=4.3.1.12 {ECO:0000313|EMBL:CCP27382.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Ornithine cyclodeaminase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT57_TEPAE
L3_079_000M1_scaffold_328_7
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6806..7552)
DNA (747bp) protein (249aa)
Arginine ABC transporter ATP-binding protein ArtM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYC8_CLOA9
artM; arginine ABC transporter ATP-binding protein ArtM
Arginine ABC transporter ATP-binding protein ArtM {ECO:0000313|EMBL:AFS78259.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_079_000M1_scaffold_328_8
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7542..8222)
DNA (681bp) protein (227aa)
Amino acid ABC transporter, amino acid-binding/permease protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJM9_9SPIO
Amino acid ABC transporter, amino acid-binding/permease protein
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC15978.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
L3_079_000M1_scaffold_328_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(8647..9357)
DNA (711bp) protein (237aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYS0_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CCZ45933.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_079_000M1_scaffold_328_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(9341..10423)
DNA (1083bp) protein (361aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SLZ1_9FIRM
L3_079_000M1_scaffold_328_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(10601..10873)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45931.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_328_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(10996..11685)
DNA (690bp) protein (230aa)
Paral putative regulator n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXJ3_9FIRM
Paral putative regulator {ECO:0000313|EMBL:CCZ45930.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
methyltransferase, YaeB/AF_0241 family
L3_079_000M1_scaffold_328_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12322..14220)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S507_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45929.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(14480..15361)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45928.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(15441..15716)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SLY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45927.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(15718..15951)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45926.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_328_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16876..17622
DNA (747bp) protein (249aa)
Putative Xre family DNA-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRI8_OSCVS
putative Xre family DNA-binding protein
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:BAK97458.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_079_000M1_scaffold_328_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17728..18885
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SI75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46426.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

18889..19818
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46425.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20227..21075)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00953.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_079_000M1_scaffold_328_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21616..22392
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2CVL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55117.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_000M1_scaffold_328_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

22700..23971
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45648.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24029..24919)
DNA (891bp) protein (297aa)
Transcriptional regulator XRE family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRT1_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDB27135.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_079_000M1_scaffold_328_24
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25039..25260)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3N7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67647.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_079_000M1_scaffold_328_25
unknown

Not on your lists

25406..26299
DNA (894bp) protein (298aa)

This feature has no annotations

L3_079_000M1_scaffold_328_26
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26332..27060
DNA (729bp) protein (243aa)
copper amine oxidase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB8E
putative carbohydrate binding protein,copper amine oxidase family protein
Putative carbohydrate binding protein,copper amine oxidase family protein {ECO:0000313|EMBL:AEV67505.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_079_000M1_scaffold_328_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27110..27391)
DNA (282bp) protein (94aa)
Stress responsive A/B barrel domain protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWW3_9FIRM
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:CCZ45710.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_328_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27408..28601)
DNA (1194bp) protein (398aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SG02_9FIRM
Aminotransferase {ECO:0000313|EMBL:CCZ45711.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_328_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28774..29202)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M618_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66435.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_079_000M1_scaffold_328_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(29195..29695)
DNA (501bp) protein (167aa)
mutX; mutator MutT protein (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RY25_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:CCZ45713.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Displaying items 1-30 of 62 in total

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