ggKbase home page

L3_079_000M1_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_339_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

503..5056
DNA (4554bp) protein (1518aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V754_9FIRM
Glutamate synthase domain 2 {ECO:0000313|EMBL:CCZ79296.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5071..6564
DNA (1494bp) protein (498aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADH) small subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMI5_9FIRM
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CCZ79295.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6910..8169
DNA (1260bp) protein (420aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUA7_9FIRM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCZ79294.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyl-accepting chemotaxis sensory transducer
L3_079_000M1_scaffold_339_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8214..8669
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79293.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8732..9757
DNA (1026bp) protein (342aa)
Acyltransferase 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEX8_9FIRM
Acyltransferase 3 {ECO:0000313|EMBL:CCZ79292.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
acyltransferase
L3_079_000M1_scaffold_339_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9831..9935
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V750_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79291.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10017..10820
DNA (804bp) protein (268aa)
Hemerythrin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMI1_9FIRM
Hemerythrin {ECO:0000313|EMBL:CCZ79290.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hemerythrin
L3_079_000M1_scaffold_339_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10965..11717
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79289.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11736..13061
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=root RepID=R5ULV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79288.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13275..14612
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79287.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_339_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14682..15239
DNA (558bp) protein (186aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5V745_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CCZ79286.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator DhaS
L3_079_000M1_scaffold_339_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15400..16776
DNA (1377bp) protein (459aa)
Radical SAM domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMH6_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCZ79285.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted Fe-S oxidoreductases
L3_079_000M1_scaffold_339_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16995..17324
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79284.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17388..19508
DNA (2121bp) protein (707aa)
Heavy metal translocating P-type ATPase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU9_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCZ79283.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L3_079_000M1_scaffold_339_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19569..20837
DNA (1269bp) protein (423aa)
Predicted carboxypeptidase (EC:3.4.19.11)
Predicted carboxypeptidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEW7_9FIRM
Predicted carboxypeptidase {ECO:0000313|EMBL:CCZ79282.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20848..21564)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V741_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79281.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21820..23604
DNA (1785bp) protein (595aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMH2_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ79280.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyl-accepting chemotaxis protein
L3_079_000M1_scaffold_339_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23782..24711
DNA (930bp) protein (310aa)
Bacitracin transport ATP-binding protein BcrA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU92_9FIRM
Bacitracin transport ATP-binding protein BcrA {ECO:0000313|EMBL:CCZ79279.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
multidrug ABC transporter ATPase
L3_079_000M1_scaffold_339_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24711..26876
DNA (2166bp) protein (722aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU6_9FIRM
ABC-type transport system involved in multi-copper enzyme maturation permease component {ECO:0000313|EMBL:CCZ79278.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L3_079_000M1_scaffold_339_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26880..27083
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79277.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_339_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27084..27281)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V737_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79276.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27460..27966
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79275.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_23
unknown

Not on your lists

27905..28093
DNA (189bp) protein (63aa)

This feature has no annotations

L3_079_000M1_scaffold_339_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28152..29357
DNA (1206bp) protein (402aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU0_9FIRM
L3_079_000M1_scaffold_339_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29594..30025
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEV6_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
mraZ protein
L3_079_000M1_scaffold_339_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30028..30993
DNA (966bp) protein (322aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Roseburia sp. CAG:18 RepID=R5V731_9FIRM
L3_079_000M1_scaffold_339_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30990..31463
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79270.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_339_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31476..33434
DNA (1959bp) protein (653aa)
Peptidoglycan glycosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU84_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CCZ79269.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidoglycan glycosyltransferase
L3_079_000M1_scaffold_339_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33501..35222
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79268.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidoglycan glycosyltransferase
L3_079_000M1_scaffold_339_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35268..36629
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEV1_9FIRM
Displaying items 1-30 of 49 in total

View Taxonomy