ggKbase home page

L3_079_000M1_scaffold_349

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_349_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

206..733
DNA (528bp) protein (176aa)
Cupin domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y040_9BACT
Cupin domain protein {ECO:0000313|EMBL:CDD24634.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
mannose-6-phosphate isomerase
L3_079_000M1_scaffold_349_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

860..1072
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24635.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1247..1708
DNA (462bp) protein (154aa)
Peroxiredoxin n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7K0_9BACT
Peroxiredoxin {ECO:0000313|EMBL:CDD24636.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
peroxiredoxin
L3_079_000M1_scaffold_349_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1732..2307
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2F5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24637.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2340..3353
DNA (1014bp) protein (338aa)
Protein RecA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XLX1_9BACT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
protein RecA
L3_079_000M1_scaffold_349_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3357..5573
DNA (2217bp) protein (739aa)
(P)ppGpp synthetase RelA/SpoT family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y044_9BACT
(P)ppGpp synthetase RelA/SpoT family {ECO:0000313|EMBL:CDD24639.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RelA/SpoT family (p)ppGpp synthetase
L3_079_000M1_scaffold_349_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5575..6045
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSM0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24640.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6065..6313
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037C9BEC
Uncharacterized protein {ECO:0000313|EMBL:CDD24641.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_349_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6385..6771
DNA (387bp) protein (129aa)
HIT family hydrolase n=1 Tax=Alistipes onderdonkii RepID=UPI00035FA076
HIT family hydrolase diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:CDD24642.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
L3_079_000M1_scaffold_349_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7432..7908
DNA (477bp) protein (159aa)
Putative transcriptional regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6XLX7_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:CDD24643.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_079_000M1_scaffold_349_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8598..9314
DNA (717bp) protein (239aa)
CAAX amino terminal protease family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y049_9BACT
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDD24644.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
CAAX amino terminal protease
L3_079_000M1_scaffold_349_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9333..10184
DNA (852bp) protein (284aa)
ABC-type metal ion transport system periplasmic component/surface adhesin n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSM5_9BACT
ABC-type metal ion transport system periplasmic component/surface adhesin {ECO:0000313|EMBL:CDD24645.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
metal ion ABC transporter substrate-binding protein
L3_079_000M1_scaffold_349_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10181..10951
DNA (771bp) protein (257aa)
ATPase component of Mn/Zn ABC-type transporter n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7K8_9BACT
ATPase component of Mn/Zn ABC-type transporter {ECO:0000313|EMBL:CDD24646.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Mn/Zn ABC transporter ATPase
L3_079_000M1_scaffold_349_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11051..12283)
DNA (1233bp) protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2G2_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDD24647.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
major facilitator superfamily protein
L3_079_000M1_scaffold_349_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12856..13146)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y053_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24649.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13440..14450)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24650.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14584..15453
DNA (870bp) protein (290aa)
SPFH domain / Band 7 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7L2_9BACT
SPFH domain / Band 7 family {ECO:0000313|EMBL:CDD24651.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SPFH domain / Band 7 family
L3_079_000M1_scaffold_349_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15864..15977
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z6L3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26142.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_349_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15977..18880
DNA (2904bp) protein (968aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YC09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26141.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
S-layer protein
L3_079_000M1_scaffold_349_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19011..20792)
DNA (1782bp) protein (594aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Alistipes onderdonkii RepID=UPI00036ECBC8
L3_079_000M1_scaffold_349_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20968..22245
DNA (1278bp) protein (426aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4A1_9BACT
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CDD26139.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Hemolysins and related proteins containing CBS domains
L3_079_000M1_scaffold_349_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22242..23264
DNA (1023bp) protein (341aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
NifR3 family TIM-barrel protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037E9577
tRNA-U20-dihydrouridine synthase
L3_079_000M1_scaffold_349_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23407..23892)
DNA (486bp) protein (162aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z533_9BACT
L3_079_000M1_scaffold_349_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24021..24425)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAE2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25576.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24447..24884)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVD1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25575.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24897..25811)
DNA (915bp) protein (305aa)
Small-conductance mechanosensitive channel n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2S9_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDD25574.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
small-conductance mechanosensitive channel
L3_079_000M1_scaffold_349_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25870..27138
DNA (1269bp) protein (423aa)
phosphoserine phosphatase n=1 Tax=Alistipes onderdonkii RepID=UPI0003755937
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:CCZ76654.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
phosphoserine phosphatase SerB
L3_079_000M1_scaffold_349_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27143..27904
DNA (762bp) protein (254aa)
Putative lipoprotein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNZ7_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDD25398.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27882..28763
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B74AA
Uncharacterized protein {ECO:0000313|EMBL:CDD25397.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_349_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28693..29706)
DNA (1014bp) protein (338aa)
GTPase Obg n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9S1_9BACT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Obg family GTPase CgtA
Displaying items 1-30 of 53 in total

View Taxonomy