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L3_079_000M1_scaffold_366

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_366_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

531..1202
DNA (672bp) protein (224aa)
Predicted transcriptional regulator n=5 Tax=Firmicutes RepID=D4JG72_9FIRM
Predicted transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDK23945.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_079_000M1_scaffold_366_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1643..2536
DNA (894bp) protein (298aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=C8WPL5_EGGLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ25430.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_366_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2511..3338
DNA (828bp) protein (276aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=10 Tax=Bacteria RepID=C8WPL4_EGGLE
L3_079_000M1_scaffold_366_4
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3350..4195
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
Pantothenate synthetase n=14 Tax=root RepID=C8WPL3_EGGLE
pantoate--beta-alanine ligase
L3_079_000M1_scaffold_366_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4209..4589
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartate 1-decarboxylase n=13 Tax=Bacteria RepID=C8WPL2_EGGLE
aspartate alpha-decarboxylase
L3_079_000M1_scaffold_366_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5018..5335)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R2J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27232.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_366_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5831..7027)
DNA (1197bp) protein (399aa)
Sodium/hydrogen exchanger n=4 Tax=Clostridiales RepID=E5XFB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27233.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cdu2; Na(+)/H(+) antiporter
L3_079_000M1_scaffold_366_8
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7461..7607)
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QLJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83115.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_366_9
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7643..18100)
DNA (10458bp) protein (3486aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83116.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
zmpB1; zinc metalloprotease ZmpB
L3_079_000M1_scaffold_366_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18084..18788)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XFB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20029.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_366_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18807..19403)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83117.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_366_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19646..21388)
DNA (1743bp) protein (581aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=4 Tax=Clostridiales RepID=E5XFB5_9FIRM
ABC transporter {ECO:0000313|EMBL:EFV20027.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_366_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21390..23114)
DNA (1725bp) protein (575aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=2 Tax=unclassified Lachnospiraceae RepID=E5XFB4_9FIRM
ABC transporter {ECO:0000313|EMBL:EFV20026.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_366_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23111..23686)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83120.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
N-acetyltransferase GCN5
L3_079_000M1_scaffold_366_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23778..24587
DNA (810bp) protein (270aa)
Transcriptional regulator, MerR family n=5 Tax=Clostridiales RepID=A5KPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27240.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
MerR family transcriptional regulator
L3_079_000M1_scaffold_366_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24574..25617)
DNA (1044bp) protein (348aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.1)
Uncharacterized protein n=3 Tax=root RepID=R5QY40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83122.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_366_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25660..25938)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridiales PF9_9FIRM">RepID=A5KPF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27242.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_366_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26105..28261)
DNA (2157bp) protein (719aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=4 Tax=Lachnospiraceae PF7_9FIRM">RepID=A5KPF7_9FIRM
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:EFV20021.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000M1_scaffold_366_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28319..28498)
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Clostridiales PF6_9FIRM">RepID=A5KPF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27246.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_366_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28511..29404)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF5_9FIRM">RepID=A5KPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27247.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC transporter
L3_079_000M1_scaffold_366_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29420..30310)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=5 Tax=Clostridiales PF4_9FIRM">RepID=A5KPF4_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV20018.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC transporter permease
L3_079_000M1_scaffold_366_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30427..31848)
DNA (1422bp) protein (474aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=5 Tax=Clostridiales PF3_9FIRM">RepID=A5KPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27249.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
carbohydrate ABC transporter substrate-binding protein
L3_079_000M1_scaffold_366_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32103..32942
DNA (840bp) protein (280aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QEY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27250.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_366_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32953..34305)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=5 Tax=Clostridiales PF0_9FIRM">RepID=A5KPF0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV20015.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
MATE efflux family protein
L3_079_000M1_scaffold_366_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34313..35038)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KPE9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK23625.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
nitrate/sulfonate/bicarbonate ABC transporter
L3_079_000M1_scaffold_366_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35116..36051)
DNA (936bp) protein (312aa)
ABC transporter, substrate-binding protein, QAT family n=4 Tax=Clostridiales RepID=A5KPE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27253.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
osmoprotectant ABC transporter substrate-binding/permease protein
L3_079_000M1_scaffold_366_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36151..36804)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QLK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27254.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
glycine betaine ABC transporter substrate-binding protein
L3_079_000M1_scaffold_366_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36808..37131)
DNA (324bp) protein (108aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83134.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_366_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37249..38247)
DNA (999bp) protein (333aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Clostridiales RepID=A5KPE5_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_079_000M1_scaffold_366_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38430..39416)
DNA (987bp) protein (329aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=5 Tax=Clostridiales RepID=A5KPE4_9FIRM
Displaying items 1-30 of 49 in total

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