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L3_079_000M1_scaffold_368

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_368_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

240..1910
DNA (1671bp) protein (557aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAS8_9ACTN
L3_079_000M1_scaffold_368_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2134..2853
DNA (720bp) protein (240aa)
B3/4 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAS9_9ACTN
B3/4 domain protein {ECO:0000313|EMBL:EBA39246.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_368_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3027..3476
DNA (450bp) protein (150aa)
Transcriptional regulator MarR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI47_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75173.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator, MarR family
L3_079_000M1_scaffold_368_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3596..4450
DNA (855bp) protein (285aa)
EDD domain protein, DegV family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT1_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EBA39248.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
degV family protein
L3_079_000M1_scaffold_368_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4531..4851
DNA (321bp) protein (107aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75190.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methylated-DNA--protein-cysteine methyltransferase
L3_079_000M1_scaffold_368_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5234..6283)
DNA (1050bp) protein (350aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EBA39250.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EBA39250.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT3_9ACTN
L3_079_000M1_scaffold_368_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6443..7642)
DNA (1200bp) protein (400aa)
Glycosyltransferase, group 4 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75188.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycosyl transferase family protein
L3_079_000M1_scaffold_368_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8169..9107
DNA (939bp) protein (313aa)
Radical SAM domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT5_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:EBA39252.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Radical SAM domain protein
L3_079_000M1_scaffold_368_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9396..9854
DNA (459bp) protein (153aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75213.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
infB; translation initiation factor IF-2
L3_079_000M1_scaffold_368_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9939..11444
DNA (1506bp) protein (502aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT7_9ACTN
nicotinate phosphoribosyltransferase
L3_079_000M1_scaffold_368_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11538..12644
DNA (1107bp) protein (369aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glutamate 5-kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT8_9ACTN
glutamate 5-kinase
L3_079_000M1_scaffold_368_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12744..14243)
DNA (1500bp) protein (500aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75210.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
pap; Proline iminopeptidase
L3_079_000M1_scaffold_368_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14275..15561
DNA (1287bp) protein (429aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU1_9ACTN
L3_079_000M1_scaffold_368_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15632..16231)
DNA (600bp) protein (200aa)
HDIG domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU2_9ACTN
HDIG domain protein {ECO:0000313|EMBL:EBA39259.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
HDIG domain-containing protein
L3_079_000M1_scaffold_368_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16339..16824)
DNA (486bp) protein (162aa)
CarD-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU3_9ACTN
CarD-like protein {ECO:0000313|EMBL:EBA39260.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_368_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


17167..19020
DNA (1854bp) protein (618aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=2 Tax=Collinsella RepID=A4EAU4_9ACTN
L3_079_000M1_scaffold_368_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19685..22111
DNA (2427bp) protein (809aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcription termination factor Rho n=2 Tax=Collinsella RepID=R5ZND9_9ACTN
transcription termination factor Rho
L3_079_000M1_scaffold_368_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22422..23822
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A421_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35887.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000M1_scaffold_368_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23830..24279
DNA (450bp) protein (150aa)
VanZ-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAU8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75223.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
VanZ family protein
L3_079_000M1_scaffold_368_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24394..25284)
DNA (891bp) protein (297aa)
fructokinase (EC:2.7.1.4)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH19_9ACTN
ROK family protein {ECO:0000313|EMBL:CDA35889.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000M1_scaffold_368_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25426..26607)
DNA (1182bp) protein (394aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75288.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_368_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27331..28191)
DNA (861bp) protein (287aa)
DNA-damage-inducible protein D n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB14_9ACTN
DNA-damage-inducible protein D {ECO:0000313|EMBL:EBA39331.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_368_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28353..29879)
DNA (1527bp) protein (509aa)
FAD binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB15_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72833.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L3_079_000M1_scaffold_368_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30136..31140)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB16_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39333.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_368_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31159..31893)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB17_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39334.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
NifU-like domain-containing protein
L3_079_000M1_scaffold_368_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32297..33106
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72830.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transposase
L3_079_000M1_scaffold_368_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33172..33606)
DNA (435bp) protein (145aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB20_9ACTN
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EBA39337.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nitrogen-fixing protein NifU
L3_079_000M1_scaffold_368_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33599..34924)
DNA (1326bp) protein (442aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase, SufS subfamily n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB21_9ACTN
L3_079_000M1_scaffold_368_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34921..36192)
DNA (1272bp) protein (424aa)
SufB/sufD domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A434_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72827.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
SufBD protein
L3_079_000M1_scaffold_368_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36192..37604)
DNA (1413bp) protein (471aa)
FeS assembly protein SufB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB23_9ACTN
FeS assembly protein SufB {ECO:0000313|EMBL:KGI72826.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Iron-regulated ABC transporter membrane component SufB
Displaying items 1-30 of 48 in total

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