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L3_079_000M1_scaffold_375

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_375_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(28..2109)
DNA (2082bp) protein (694aa)
Putative conjugative transposon protein traG n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKC3_BACF6
traG; putative conjugative transposon protein traG
Putative conjugative transposon protein traG {ECO:0000313|EMBL:CBW20844.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2106..2486)
DNA (381bp) protein (127aa)
Putative conjugative transposon protein traF n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKC2_BACF6
traF; putative conjugative transposon protein traF
Putative conjugative transposon protein traF {ECO:0000313|EMBL:CBW20843.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_3
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2491..2790)
DNA (300bp) protein (100aa)
Conjugative transposon protein TraE n=7 Tax=Bacteroidales RepID=F5XA41_PORGT
traE; conjugative transposon protein TraE
Conjugative transposon protein TraE {ECO:0000313|EMBL:BAK25173.1}; TaxID=1030843 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis (strain TDC60).;"
L3_079_000M1_scaffold_375_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2964..3554)
DNA (591bp) protein (197aa)
Putative conjugative transposon protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKC0_BACF6
traD; putative conjugative transposon protein
Putative conjugative transposon protein {ECO:0000313|EMBL:CBW20841.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3542..4282)
DNA (741bp) protein (247aa)
Putative conjugative transposon protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB9_BACF6
traA; putative conjugative transposon protein
Putative conjugative transposon protein {ECO:0000313|EMBL:CBW20840.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4312..4905)
DNA (594bp) protein (198aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB8_BACF6
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBW20839.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4902..5276)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20838.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5278..5706)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=E1WKB6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20837.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5690..6472)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB5_BACF6
parA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20836.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_10
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7241..7654
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis F0569 RepID=U2JS74_PORGN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ81641.1}; TaxID=1321822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis F0566.;"
L3_079_000M1_scaffold_375_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7639..8868
DNA (1230bp) protein (410aa)
Putative mobilisation protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB2_BACF6
mobB; putative mobilisation protein
Putative mobilisation protein {ECO:0000313|EMBL:CBW20833.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8883..10898
DNA (2016bp) protein (672aa)
Putative transmembrane mobilisation protein n=2 Tax=Bacteroidales RepID=E1WKB1_BACF6
Putative transmembrane mobilisation protein {ECO:0000313|EMBL:CBW20832.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative transmembrane mobilisation protein
L3_079_000M1_scaffold_375_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10971..11417
DNA (447bp) protein (149aa)
Putative membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKB0_BACF6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBW20831.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11707..13248
DNA (1542bp) protein (514aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA9_BACF6
putative RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CBW20830.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_15
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13350..13871
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9HVP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS08073.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_079_000M1_scaffold_375_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13993..15288
DNA (1296bp) protein (432aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA7_BACF6
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBW20828.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15285..15701
DNA (417bp) protein (139aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA6_BACF6
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBW20827.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_18
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16213..16752)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Prevotella stercorea DSM 18206 RepID=G6AWS3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHJ41131.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
PF08020 family protein
L3_079_000M1_scaffold_375_19
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16835..17005)
DNA (171bp) protein (57aa)
Peptidase family S51 n=1 Tax=Prevotella intermedia (strain 17) RepID=I1YSE1_PREI7
peptidase family S51
Peptidase {ECO:0000313|EMBL:KJJ87363.1}; TaxID=1347790 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella intermedia ZT.;"
L3_079_000M1_scaffold_375_20
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17019..17369)
DNA (351bp) protein (117aa)
S51 family peptidase {ECO:0000313|EMBL:EGQ14955.1}; EC=3.4.-.- {ECO:0000313|EMBL:EGQ14955.1};; TaxID=997352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens ATCC 33563.;"
S51 family peptidase n=1 Tax=Prevotella nigrescens ATCC 33563 RepID=F9DAL4_9BACT
peptidase family S51
L3_079_000M1_scaffold_375_21
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17821..18078)
DNA (258bp) protein (86aa)
RteC protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CJC4_9BACE
RteC protein {ECO:0000313|EMBL:ERI84640.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
RteC protein
L3_079_000M1_scaffold_375_22
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18134..18421)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Porphyromonas cansulci JCM 13913 RepID=S4PLM6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN71221.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
hypothetical protein
L3_079_000M1_scaffold_375_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18450..20231)
DNA (1782bp) protein (594aa)
Putative transport-related membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA2_BACF6
Putative transport-related membrane protein {ECO:0000313|EMBL:CBW20823.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative transport-related membrane protein
L3_079_000M1_scaffold_375_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20254..22002)
DNA (1749bp) protein (583aa)
Putative transport-related membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA1_BACF6
putative transport-related membrane protein
Putative transport-related membrane protein {ECO:0000313|EMBL:CBW20822.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22010..22573)
DNA (564bp) protein (188aa)
Putative transmembrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKA0_BACF6
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CBW20821.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22710..23948)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WK99_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20820.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23982..26324)
DNA (2343bp) protein (781aa)
Putative TonB-dependent outer membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WK98_BACF6
Putative TonB-dependent outer membrane protein {ECO:0000313|EMBL:CBW20819.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative TonB-dependent outer membrane protein
L3_079_000M1_scaffold_375_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26424..26960)
DNA (537bp) protein (179aa)
Putative membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WK97_BACF6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBW20818.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27169..27909)
DNA (741bp) protein (247aa)
Putative TetR-family transcriptional n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WK96_BACF6
Putative TetR-family transcriptional
Putative TetR-family transcriptional {ECO:0000313|EMBL:CBW20817.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000M1_scaffold_375_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28168..29562
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WK95_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20816.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Displaying items 1-30 of 47 in total

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