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L3_079_000M1_scaffold_387

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_387_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129..1649)
DNA (1521bp) protein (507aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E218_CLOSO
Site-specific recombinase {ECO:0000313|EMBL:CEP42910.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
site-specific recombinase
L3_079_000M1_scaffold_387_2
unknown

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comp(1649..1888)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_079_000M1_scaffold_387_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2179..2529)
DNA (351bp) protein (117aa)
DNA-binding protein n=1 Tax=Clostridium difficile E25 RepID=U3X2F5_CLODI
DNA-binding protein {ECO:0000313|EMBL:CEO04824.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA-binding protein
L3_079_000M1_scaffold_387_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2819..3064
DNA (246bp) protein (82aa)
Conserved domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REW1_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT27626.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
DNA-binding phage protein
L3_079_000M1_scaffold_387_5
unknown

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3129..3311
DNA (183bp) protein (61aa)

This feature has no annotations

L3_079_000M1_scaffold_387_6
unknown

Not on your lists

3304..3825
DNA (522bp) protein (174aa)

This feature has no annotations

L3_079_000M1_scaffold_387_7
unknown

Not on your lists

3844..3960
DNA (117bp) protein (39aa)

This feature has no annotations

L3_079_000M1_scaffold_387_8
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3975..4760
DNA (786bp) protein (262aa)
Prophage antirepressor n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SWH3_CLOC7
Antirepressor {ECO:0000313|EMBL:KHS56201.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
prophage antirepressor
L3_079_000M1_scaffold_387_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4738..5430
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=R0AVF3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63707.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_387_10
unknown

Not on your lists

5489..5635
DNA (147bp) protein (49aa)

This feature has no annotations

L3_079_000M1_scaffold_387_11
Enterobacteria phage RB3, T4likevirus, Caudovirales, Viruses

Not on your lists

5637..6161
DNA (525bp) protein (175aa)
Homing endonuclease n=2 Tax=unclassified T4-like viruses RepID=S5M9E3_9CAUD
Homing endonuclease {ECO:0000313|EMBL:AIT72915.1}; TaxID=31533 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Enterobacteria phage RB3 (Bacteriophage RB3).;"
resolvase/recombinase
L3_079_000M1_scaffold_387_12
unknown

Not on your lists

6162..6467
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037002E6
L3_079_000M1_scaffold_387_13
unknown

Not on your lists

6544..6837
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036F0B19
L3_079_000M1_scaffold_387_14
Clostridium phage phiMMP02, Caudovirales, Viruses

Not on your lists

6824..7441
DNA (618bp) protein (206aa)
ERF superfamily protein n=5 Tax=root RepID=T2UF44_CLODI
Putative essential recombination function protein {ECO:0000313|EMBL:AFO72117.1}; TaxID=1204534 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiMMP02.;"
recombination function protein
L3_079_000M1_scaffold_387_15
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

7469..8623
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000366A860
DNA replication protein {ECO:0000313|EMBL:CDA90569.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
replication protein
L3_079_000M1_scaffold_387_16
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8624..9355
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000365A75A
Uncharacterized protein {ECO:0000313|EMBL:KHS55694.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hypothetical protein
L3_079_000M1_scaffold_387_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9396..10304
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000360C9B6
RpoD5; DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L3_079_000M1_scaffold_387_18
unknown

Not on your lists

10323..10508
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000375530D
L3_079_000M1_scaffold_387_19
unknown

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10508..10672
DNA (165bp) protein (55aa)

This feature has no annotations

L3_079_000M1_scaffold_387_20
unknown

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10669..10788
DNA (120bp) protein (40aa)

This feature has no annotations

L3_079_000M1_scaffold_387_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10778..11167
DNA (390bp) protein (130aa)
VRR-NUC domain-containing protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DT92_9FIRM
VRR-NUC domain-containing protein {ECO:0000313|EMBL:CEQ26693.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
conserved hypothetical protein
L3_079_000M1_scaffold_387_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11178..11960
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD102 RepID=J8IPN4_BACCE
NUMOD4 domain-containing protein {ECO:0000313|EMBL:CEP39609.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_079_000M1_scaffold_387_23
unknown

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12185..12328
DNA (144bp) protein (48aa)

This feature has no annotations

L3_079_000M1_scaffold_387_24
unknown

Not on your lists

12343..12708
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036684E2
L3_079_000M1_scaffold_387_25
unknown

Not on your lists

12701..13027
DNA (327bp) protein (109aa)

This feature has no annotations

L3_079_000M1_scaffold_387_26
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13014..13574
DNA (561bp) protein (187aa)
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JP80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32952.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_079_000M1_scaffold_387_27
unknown

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comp(13598..13732)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_000M1_scaffold_387_28
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

13835..14788
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BLT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66502.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_079_000M1_scaffold_387_29
unknown

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14785..14973
DNA (189bp) protein (63aa)

This feature has no annotations

L3_079_000M1_scaffold_387_30
unknown

Not on your lists

14974..15279
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 78 in total

View Taxonomy