ggKbase home page

L3_079_000M1_scaffold_417

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_417_1
unknown

Not on your lists

comp(2..244)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_079_000M1_scaffold_417_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(400..1380)
DNA (981bp) protein (327aa)
ROK family protein n=3 Tax=Bacteroides RepID=B0NL43_BACSE
ROK family protein {ECO:0000313|EMBL:CDA47572.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
ROK family protein
L3_079_000M1_scaffold_417_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1558..2274
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=B0NL44_BACSE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS16902.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ABC transporter related protein
L3_079_000M1_scaffold_417_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2336..3592
DNA (1257bp) protein (419aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroides stercoris RepID=B0NL45_BACSE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS16903.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000M1_scaffold_417_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3599..4840
DNA (1242bp) protein (414aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroides stercoris RepID=B0NL46_BACSE
ABC transporter permease {ECO:0000313|EMBL:EPH21358.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_079_000M1_scaffold_417_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4901..6007
DNA (1107bp) protein (369aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides stercoris RepID=B0NL47_BACSE
HlyD family secretion protein {ECO:0000313|EMBL:EPH21357.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
efflux transporter, RND family, MFP subunit
L3_079_000M1_scaffold_417_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6037..7365
DNA (1329bp) protein (443aa)
Outer membrane channel protein n=2 Tax=Bacteroides RepID=S3YG88_BACSE
Outer membrane channel protein {ECO:0000313|EMBL:EPH21356.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
outer membrane efflux protein
L3_079_000M1_scaffold_417_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7555..8382)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NL49_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16908.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000M1_scaffold_417_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8506..9348)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NL32_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16909.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000M1_scaffold_417_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9641..10642
DNA (1002bp) protein (334aa)
Lactate/malate dehydrogenase, NAD binding domain protein n=2 Tax=Bacteroides stercoris RepID=B0NL33_BACSE
Lactate/malate dehydrogenase NAD binding domain protein {ECO:0000313|EMBL:CDA47585.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Lactate/malate dehydrogenase
L3_079_000M1_scaffold_417_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10910..11158)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YIA1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21352.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000M1_scaffold_417_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11182..14466)
DNA (3285bp) protein (1095aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLK9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16663.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
alpha-L-rhamnosidase
L3_079_000M1_scaffold_417_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14663..16810)
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLL0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16664.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000M1_scaffold_417_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16945..19806)
DNA (2862bp) protein (954aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046490}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046490};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Glycosyl hydrolase family 2 TIM barrel domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ANJ4_9BACE
beta-galactosidase
L3_079_000M1_scaffold_417_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19922..21211)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YUT7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21348.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
pectate lyase
L3_079_000M1_scaffold_417_16
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21343..23331)
DNA (1989bp) protein (663aa)
SusD family protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MEN0_9BACE
SusD family protein {ECO:0000313|EMBL:CCY90180.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
RagB/SusD domain-containing protein
L3_079_000M1_scaffold_417_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23340..26549)
DNA (3210bp) protein (1070aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CHM0_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA72364.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
TonB-dependent receptor
L3_079_000M1_scaffold_417_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26825..27751)
DNA (927bp) protein (309aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=B0NLN4_BACSE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS16686.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
transcriptional regulator
L3_079_000M1_scaffold_417_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27899..29221)
DNA (1323bp) protein (441aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDS16687.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDS16687.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLN5_BACSE
glycosyl hydrolase family 88
L3_079_000M1_scaffold_417_20
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29239..30393)
DNA (1155bp) protein (385aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=2 Tax=Bacteroides RepID=B0NLR7_BACSE
Lactaldehyde reductase {ECO:0000313|EMBL:CDA48197.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_079_000M1_scaffold_417_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30405..31214)
DNA (810bp) protein (270aa)
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=2 Tax=Bacteroides stercoris RepID=S3YG75_BACSE
Rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EPH21341.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000M1_scaffold_417_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31250..32281)
DNA (1032bp) protein (344aa)
L-rhamnose-proton symport protein (RhaT) n=3 Tax=Bacteroides RepID=B0NLR9_BACSE
L-rhamnose-proton symport protein (RhaT) {ECO:0000313|EMBL:EDS16690.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
sugar:proton symporter
L3_079_000M1_scaffold_417_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32372..33625)
DNA (1254bp) protein (418aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=3 Tax=Bacteroides RepID=B0NLS0_BACSE
L3_079_000M1_scaffold_417_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33657..35123)
DNA (1467bp) protein (489aa)
Rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YUS7_BACSE
Rhamnulokinase {ECO:0000313|EMBL:EPH21338.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000M1_scaffold_417_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35255..36805)
DNA (1551bp) protein (517aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLP9_BACSE
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDS16693.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_079_000M1_scaffold_417_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36834..38669)
DNA (1836bp) protein (612aa)
FG-GAP repeat protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLQ0_BACSE
FG-GAP repeat protein {ECO:0000313|EMBL:EDS16694.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
silent information regulator protein Sir2
L3_079_000M1_scaffold_417_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38666..41455)
DNA (2790bp) protein (930aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLQ1_BACSE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDS16695.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000M1_scaffold_417_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41458..43986)
DNA (2529bp) protein (843aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDS16696.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDS16696.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLQ2_BACSE
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
L3_079_000M1_scaffold_417_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44418..44891
DNA (474bp) protein (158aa)
Arginine repressor n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLQ4_BACSE
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ArgR family transcriptional regulator
L3_079_000M1_scaffold_417_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44937..45494
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NLQ5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16699.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
Displaying items 1-30 of 40 in total

View Taxonomy