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L3_079_000M1_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_428_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..651)
DNA (651bp) protein (217aa)
Cobyric acid synthase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GHK8_9CLOT
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_428_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(787..1773)
DNA (987bp) protein (329aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium sp. CAG:81 RepID=R5G3T1_9CLOT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_428_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1902..2192)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G7W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11979.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_428_4
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2239..2865)
DNA (627bp) protein (209aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Fructose-2 6-bisphosphatase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4E7_9CLOT
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CCY11978.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_428_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2862..3617)
DNA (756bp) protein (252aa)
cobalamin 5'-phosphate synthase/cobalamin synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Cobalamin synthase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX09_9FIRM
L3_079_000M1_scaffold_428_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3614..4822)
DNA (1209bp) protein (403aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344, ECO:0000313|EMBL:CBL42352.1}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328, ECO:0000313|EMBL:CBL42352.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX10_9FIRM
L3_079_000M1_scaffold_428_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4944..6566)
DNA (1623bp) protein (541aa)
cobyrinic acid a,c-diamide synthase (EC:6.3.5.9)
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:CBL42353.1}; EC=6.3.5.9 {ECO:0000313|EMBL:CBL42353.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Cobyrinic acid a,c-diamide synthase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX11_9FIRM
L3_079_000M1_scaffold_428_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6589..8610)
DNA (2022bp) protein (674aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:CBL42354.1}; EC=2.1.1.132 {ECO:0000313|EMBL:CBL42354.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit (EC:2.1.1.132)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX12_9FIRM
L3_079_000M1_scaffold_428_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8607..9347)
DNA (741bp) protein (247aa)
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3 methyltransferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GHI6_9CLOT
Precorrin-3 methyltransferase {ECO:0000313|EMBL:CCY11961.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_428_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9344..10114)
DNA (771bp) protein (257aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:CBL42356.1}; EC=2.1.1.133 {ECO:0000313|EMBL:CBL42356.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Precorrin-4 C11-methyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX14_9FIRM
L3_079_000M1_scaffold_428_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10111..11415)
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX15_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42357.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_428_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11513..12931)
DNA (1419bp) protein (473aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4C4_9CLOT
Cobalamin biosynthesis protein CbiD
L3_079_000M1_scaffold_428_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12934..15417)
DNA (2484bp) protein (828aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Porphobilinogen deaminase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX17_9FIRM
porphobilinogen deaminase
L3_079_000M1_scaffold_428_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15421..16113)
DNA (693bp) protein (231aa)
precorrin-2 C20-methyltransferase/cobalt-factor II C20-methyltransferase (EC:2.1.1.130 2.1.1.151)
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GHH9_9CLOT
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase {ECO:0000313|EMBL:CCY11956.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_428_15
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16210..17013)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G3Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11955.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_428_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17142..18422)
DNA (1281bp) protein (427aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:CBL42363.1}; EC=6.1.1.11 {ECO:0000313|EMBL:CBL42363.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Seryl-tRNA synthetase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX21_9FIRM
L3_079_000M1_scaffold_428_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18506..19333)
DNA (828bp) protein (276aa)
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591, ECO:0000313|EMBL:CBL42364.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Pyridoxal/pyridoxine/pyridoxamine kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX22_9FIRM
L3_079_000M1_scaffold_428_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19534..20118)
DNA (585bp) protein (195aa)
Predicted membrane protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX23_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL42365.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_428_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20384..21100)
DNA (717bp) protein (239aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase {ECO:0000313|EMBL:CBL42366.1}; EC=2.7.6.2 {ECO:0000313|EMBL:CBL42366.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Thiamine diphosphokinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX24_9FIRM
L3_079_000M1_scaffold_428_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21129..21794)
DNA (666bp) protein (222aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBL42367.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBL42367.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Ribulose-phosphate 3-epimerase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX25_9FIRM
L3_079_000M1_scaffold_428_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21799..22677)
DNA (879bp) protein (293aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:81 RepID=R5G7S9_9CLOT
L3_079_000M1_scaffold_428_22
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22674..24848)
DNA (2175bp) protein (725aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:CBL42368.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBL42368.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX26_9FIRM
L3_079_000M1_scaffold_428_23
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24845..25585)
DNA (741bp) protein (247aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CBL42369.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBL42369.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Serine/threonine protein phosphatase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX27_9FIRM
L3_079_000M1_scaffold_428_24
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25582..26628)
DNA (1047bp) protein (349aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX28_9FIRM
L3_079_000M1_scaffold_428_25
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26731..28062)
DNA (1332bp) protein (444aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Sun protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4A5_9CLOT
sun protein
L3_079_000M1_scaffold_428_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28052..28777)
DNA (726bp) protein (242aa)
Predicted Zn-dependent protease n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX29_9FIRM
Predicted Zn-dependent protease
Predicted Zn-dependent protease {ECO:0000313|EMBL:CBL42371.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_428_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28872..29798)
DNA (927bp) protein (309aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Methionyl-tRNA formyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX30_9FIRM
L3_079_000M1_scaffold_428_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29800..30276)
DNA (477bp) protein (159aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Peptide deformylase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX31_9FIRM
L3_079_000M1_scaffold_428_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30314..32533)
DNA (2220bp) protein (740aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
replication restart DNA helicase PriA (EC:3.6.1.-)
Replication restart DNA helicase PriA n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX32_9FIRM
L3_079_000M1_scaffold_428_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32570..34015)
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBL42375.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX33_9FIRM
Displaying items 1-30 of 44 in total

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