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L3_079_000M1_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_429_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

749..925
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y3N9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12987.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_429_2
unknown

Not on your lists

1362..1475
DNA (114bp) protein (38aa)

This feature has no annotations

L3_079_000M1_scaffold_429_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1844..5002
DNA (3159bp) protein (1053aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZRE5_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN18294.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
TonB-dependent receptor
L3_079_000M1_scaffold_429_4
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5022..6560
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6ARG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57217.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
RagB/SusD family protein
L3_079_000M1_scaffold_429_5
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6644..8128
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CP84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB57218.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_079_000M1_scaffold_429_6
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8130..9308
DNA (1179bp) protein (393aa)
Chromate transporter chromate ion transporter (CHR) family protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CGD9_9BACE
Chromate transporter chromate ion transporter (CHR) family protein {ECO:0000313|EMBL:CDA74685.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
chromate transporter, chromate ion transporter (CHR) family
L3_079_000M1_scaffold_429_7
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9313..10320
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A408_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46950.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
sulfotransferase
L3_079_000M1_scaffold_429_8
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10339..13323
DNA (2985bp) protein (995aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6DA05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA74687.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
L3_079_000M1_scaffold_429_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13426..16587
DNA (3162bp) protein (1054aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6ARF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46952.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_079_000M1_scaffold_429_10
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16631..17860
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BB71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57223.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_079_000M1_scaffold_429_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18642..19355)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85583.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000M1_scaffold_429_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19432..24270)
DNA (4839bp) protein (1613aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0K5_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD15080.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AcrB/AcrD/AcrF family cation efflux protein
L3_079_000M1_scaffold_429_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24267..27374)
DNA (3108bp) protein (1036aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZAL9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12689.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AcrB/AcrD/AcrF family cation efflux protein
L3_079_000M1_scaffold_429_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27371..28423)
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Parabacteroides RepID=A7AGW9_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD15082.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation efflux system outer membrane protein
L3_079_000M1_scaffold_429_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28431..29930)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12691.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane lipoprotein silC
L3_079_000M1_scaffold_429_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29944..33216)
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7M1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15084.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
xanthan lyase XalB
L3_079_000M1_scaffold_429_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33233..34126)
DNA (894bp) protein (298aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=A7AGX2_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN85589.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_429_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34291..34869)
DNA (579bp) protein (193aa)
Rubrerythrin n=4 Tax=Parabacteroides RepID=A7AGX3_9PORP
Rubrerythrin {ECO:0000313|EMBL:EKN12694.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rubrerythrin
L3_079_000M1_scaffold_429_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35171..36847
DNA (1677bp) protein (559aa)
Sulfate permease n=3 Tax=Parabacteroides merdae RepID=A7AGX4_9PORP
Sulfate permease {ECO:0000313|EMBL:EDN85591.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sulfate transporter permease
L3_079_000M1_scaffold_429_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36933..37097)
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15088.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_429_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37262..40066
DNA (2805bp) protein (935aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AGX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85594.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000M1_scaffold_429_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40139..40918)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12700.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Fe-S oxidoreductase
L3_079_000M1_scaffold_429_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41005..43032)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15092.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_429_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43045..43851)
DNA (807bp) protein (269aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15093.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_429_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43873..43998)
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15094.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000M1_scaffold_429_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44133..44699
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AGY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12704.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000M1_scaffold_429_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44691..45221)
DNA (531bp) protein (177aa)
RNA methyltransferase, TrmH family n=4 Tax=Parabacteroides RepID=A7AGY3_9PORP
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDN85600.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tRNA/rRNA methyltransferase
L3_079_000M1_scaffold_429_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45671..45814
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85601.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_000M1_scaffold_429_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45975..46961
DNA (987bp) protein (329aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Quinolinate synthase A n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGY5_9PORP
quinolinate synthetase
L3_079_000M1_scaffold_429_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47037..49367)
DNA (2331bp) protein (777aa)
Two component regulator propeller n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7N3_9PORP
Two component regulator propeller {ECO:0000313|EMBL:CDD15099.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
immunoreactive 84 kDa antigen PG93
Displaying items 1-30 of 33 in total

View Taxonomy