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L3_079_000M1_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_441_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
Possible dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFX0_9FIRM
Possible dehydrogenase {ECO:0000313|EMBL:CCZ79627.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
dehydrogenase
L3_079_000M1_scaffold_441_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

223..2421
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NAL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80339.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
beta-glucosidase
L3_079_000M1_scaffold_441_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2506..2682
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79164.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_441_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2725..4356
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79163.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_000M1_scaffold_441_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4372..4893
DNA (522bp) protein (174aa)
Nitroreductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEK1_9FIRM
Nitroreductase {ECO:0000313|EMBL:CCZ79162.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitroreductase
L3_079_000M1_scaffold_441_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5183..6073
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79161.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_441_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6176..7627
DNA (1452bp) protein (484aa)
dipeptidase A. Cysteine peptidase. MEROPS family C69 (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79160.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_441_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7624..8970)
DNA (1347bp) protein (449aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTX6_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ79159.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_441_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9133..10620
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULH4_9FIRM
histidine kinase
L3_079_000M1_scaffold_441_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10617..11633
DNA (1017bp) protein (339aa)
Sugar-binding domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEJ9_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CCZ79157.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcriptional regulator
L3_079_000M1_scaffold_441_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11648..13258
DNA (1611bp) protein (537aa)
Response regulator receiver domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6S0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ79156.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_079_000M1_scaffold_441_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13255..14268)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79155.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L3_079_000M1_scaffold_441_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14659..15642
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79154.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter substrate-binding protein
L3_079_000M1_scaffold_441_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15757..17256
DNA (1500bp) protein (500aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULH0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ79153.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter ATP-binding protein
L3_079_000M1_scaffold_441_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17285..18340
DNA (1056bp) protein (352aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEJ4_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79152.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter permease
L3_079_000M1_scaffold_441_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18342..19364
DNA (1023bp) protein (341aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6R6_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79151.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter permease
L3_079_000M1_scaffold_441_17
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19707..21473
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25913.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
carbon starvation protein
L3_079_000M1_scaffold_441_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21475..22338)
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C9L506_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG83451.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
AraC family transcriptional regulator
L3_079_000M1_scaffold_441_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22487..23788
DNA (1302bp) protein (434aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJM0_9FIRM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCZ78453.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_079_000M1_scaffold_441_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23785..24660
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5URT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78454.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter permease
L3_079_000M1_scaffold_441_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24657..25499
DNA (843bp) protein (281aa)
Sugar ABC transporter permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKA5_9FIRM
Sugar ABC transporter permease component {ECO:0000313|EMBL:CCZ78455.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_079_000M1_scaffold_441_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25521..28328
DNA (2808bp) protein (936aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78456.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_441_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28333..29793
DNA (1461bp) protein (487aa)
maltooligosyl trehalose synthase (EC:2.4.1.7 5.4.99.15)
Sucrose phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCF7_9FIRM
Sucrose phosphorylase {ECO:0000313|EMBL:CCZ78457.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_441_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29867..30436)
DNA (570bp) protein (190aa)
Predicted metal-dependent hydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJM4_9FIRM
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CCZ78458.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_441_25
unknown

Not on your lists

30489..30638
DNA (150bp) protein (50aa)

This feature has no annotations

L3_079_000M1_scaffold_441_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30666..32369
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia sp. CAG:18 RepID=R5URU0_9FIRM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCZ78459.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyl-accepting chemotaxis sensory transducer
L3_079_000M1_scaffold_441_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32458..33150)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78460.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_441_28
unknown

Not on your lists

comp(33199..33375)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_079_000M1_scaffold_441_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33398..33736
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78461.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_441_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33733..34062
DNA (330bp) protein (110aa)
toxin RelE n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030B04C3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73587.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying items 1-30 of 47 in total

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