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L3_079_000M1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_447_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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279..1151
DNA (873bp) protein (291aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I569_9FIRM
L3_079_000M1_scaffold_447_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1184..2380
DNA (1197bp) protein (399aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFJ7_9FIRM
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:CDB45344.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_447_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2439..3191)
DNA (753bp) protein (251aa)
Methyltransferase domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7M4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDB45345.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
type 11 methyltransferase
L3_079_000M1_scaffold_447_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3201..3974)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45346.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_079_000M1_scaffold_447_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3984..4754)
DNA (771bp) protein (257aa)
Oligopeptide ABC transport system ATP-binding protein OppF3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4W2_9FIRM
Oligopeptide ABC transport system ATP-binding protein OppF3 {ECO:0000313|EMBL:CDB45347.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
oppF3; oligopeptide ABC transport system ATP-binding protein OppF3
L3_079_000M1_scaffold_447_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4751..5551)
DNA (801bp) protein (267aa)
ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I574_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB45348.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ABC transporter related protein
L3_079_000M1_scaffold_447_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5563..7104)
DNA (1542bp) protein (514aa)
Oligopeptide ABC transport system substrate binding protein OppA3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFK3_9FIRM
Oligopeptide ABC transport system substrate binding protein OppA3 {ECO:0000313|EMBL:CDB45349.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
oppA3; oligopeptide ABC transport system substrate binding protein OppA3
L3_079_000M1_scaffold_447_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7129..7959)
DNA (831bp) protein (277aa)
Oligopeptide ABC transport system permease OppC3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7M9_9FIRM
Oligopeptide ABC transport system permease OppC3 {ECO:0000313|EMBL:CDB45350.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
oppC3; oligopeptide ABC transport system permease OppC3
L3_079_000M1_scaffold_447_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7959..8903)
DNA (945bp) protein (315aa)
Oligopeptide ABC transport system permease OppB3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ29_9FIRM
Oligopeptide ABC transport system permease OppB3 {ECO:0000313|EMBL:CDB45351.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
oppB3; oligopeptide ABC transport system permease OppB3
L3_079_000M1_scaffold_447_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9254..9676
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45352.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_447_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(9777..11459)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJ95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15657.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Recombinase.
L3_079_000M1_scaffold_447_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12103..12537
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XB48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05631.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
transcriptional regulator
L3_079_000M1_scaffold_447_13
Bacillus methylotrophicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12550..13086
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum NAU-B3 RepID=U4PVL9_BACAM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIU82582.1}; TaxID=492670 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methylotrophicus.;"
L3_079_000M1_scaffold_447_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13537..13977
DNA (441bp) protein (147aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9V015_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF41286.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_079_000M1_scaffold_447_15
unknown

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13967..14095
DNA (129bp) protein (43aa)

This feature has no annotations

L3_079_000M1_scaffold_447_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14609..15058)
DNA (450bp) protein (150aa)
RNA polymerase sigma-24 subunit ECF subfamily protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I579_9FIRM
RNA polymerase sigma-24 subunit ECF subfamily protein {ECO:0000313|EMBL:CDB45353.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_447_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15793..16155
DNA (363bp) protein (121aa)
Putative Xre family DNA binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFF1_9FIRM
Putative Xre family DNA binding protein {ECO:0000313|EMBL:CDB45304.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_447_18
Acinetobacter sp. NIPH 1847, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16183..22392
DNA (6210bp) protein (2070aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9NMY5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX07016.1}; TaxID=1217697 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 1847.;"
YadA-like protein
L3_079_000M1_scaffold_447_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22413..22835
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46808.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_447_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22903..24120)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44876.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_447_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24236..25588
DNA (1353bp) protein (451aa)
RecF/RecN/SMC protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6A9_9FIRM
RecF/RecN/SMC protein {ECO:0000313|EMBL:CDB44875.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ATP-binding protein
L3_079_000M1_scaffold_447_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25585..26364
DNA (780bp) protein (260aa)
TIGR02646 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IE62_9FIRM
TIGR02646 family protein {ECO:0000313|EMBL:CDB44874.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_447_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26477..27850
DNA (1374bp) protein (458aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I3W2_9FIRM
Phosphomannomutase {ECO:0000313|EMBL:CDB44873.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_447_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27934..28824
DNA (891bp) protein (297aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3L2_9FIRM
L3_079_000M1_scaffold_447_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28834..29826
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHQ1_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDB44871.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
UDP-glucose 4-epimerase
L3_079_000M1_scaffold_447_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29927..31858
DNA (1932bp) protein (644aa)
ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I6A5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB44870.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ABC transporter
L3_079_000M1_scaffold_447_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31866..32375
DNA (510bp) protein (170aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IE57_9FIRM
CMP/dCMP deaminase zinc-binding protein
L3_079_000M1_scaffold_447_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32635..33063
DNA (429bp) protein (143aa)
Transcriptional regulator MarR family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I3V7_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDB44868.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transcriptional regulator, MarR family
L3_079_000M1_scaffold_447_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33302..33658
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J3K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44867.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_447_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33860..34429
DNA (570bp) protein (190aa)
Chromate transport protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IHP7_9FIRM
Chromate transport protein {ECO:0000313|EMBL:CDB44866.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
chromate transport protein
Displaying items 1-30 of 46 in total

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