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L3_079_000M1_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_448_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

229..771
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78480.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein conserved in cyanobacteria
L3_079_000M1_scaffold_448_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

897..1760
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78481.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_3
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1899..2189
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B69DA6
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03552.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L3_079_000M1_scaffold_448_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2333..2992
DNA (660bp) protein (220aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCI4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ78482.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L3_079_000M1_scaffold_448_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3222..5189
DNA (1968bp) protein (656aa)
Myosin-crossreactive antigen n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPG6_9FIRM
Myosin-crossreactive antigen {ECO:0000313|EMBL:CCZ77669.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Myosin-crossreactive antigen
L3_079_000M1_scaffold_448_6
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5273..6535)
DNA (1263bp) protein (421aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blautia sp. CAG:237 RepID=R6LUT4_9FIRM
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
L3_079_000M1_scaffold_448_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6647..7924)
DNA (1278bp) protein (426aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHD0_9FIRM
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:CCZ77668.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7927..8640)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77667.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8716..9117)
DNA (402bp) protein (134aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU48_9FIRM
L3_079_000M1_scaffold_448_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..9973)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Pantothenate synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMD5_9FIRM
putative pantoate--beta-alanine ligase
L3_079_000M1_scaffold_448_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10055..10882)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6Z6_9FIRM
L3_079_000M1_scaffold_448_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10883..11758)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VER8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79237.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12073..12363
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULQ5_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
30S ribosomal protein S6
L3_079_000M1_scaffold_448_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12385..12828
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU53_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
single-strand binding protein
L3_079_000M1_scaffold_448_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12870..13127
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UME0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rpsR; 30S ribosomal protein S18
L3_079_000M1_scaffold_448_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13430..14737
DNA (1308bp) protein (436aa)
Putative ATP/GTP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V702_9FIRM
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:CCZ79241.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative ATP/GTP-binding protein
L3_079_000M1_scaffold_448_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14850..15182)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VES3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79242.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
L3_079_000M1_scaffold_448_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15252..16670)
DNA (1419bp) protein (473aa)
ansB1; aspartate ammonia-lyase AnsB (EC:4.3.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79243.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_079_000M1_scaffold_448_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17003..17491
DNA (489bp) protein (163aa)
Transcriptional regulator AsnC family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU57_9FIRM
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CCZ79244.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L3_079_000M1_scaffold_448_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17565..17999
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25988.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L3_079_000M1_scaffold_448_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18154..18723
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63225.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
BioY family protein
L3_079_000M1_scaffold_448_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..19410
DNA (669bp) protein (223aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG13_9FIRM
L3_079_000M1_scaffold_448_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19546..19851
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UME3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79245.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted nucleotidyltransferases
L3_079_000M1_scaffold_448_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19823..20245
DNA (423bp) protein (141aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JK33_9FIRM
nucleotidyltransferase substrate binding protein, HI0074 family
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:CBK91084.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_448_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20242..20544
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VES8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79247.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_26
unknown

Not on your lists

20566..20694
DNA (129bp) protein (43aa)

This feature has no annotations

L3_079_000M1_scaffold_448_27
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20824..21192
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TI95_BURSG
Uncharacterized protein {ECO:0000313|EMBL:ADN59603.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
hypothetical protein
L3_079_000M1_scaffold_448_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21134..21517
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79478.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_448_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21569..22024
DNA (456bp) protein (152aa)
RelA/SpoT domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFI7_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CCZ79477.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Guanosine polyphosphate pyrophosphohydrolases/synthetases
L3_079_000M1_scaffold_448_30
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22250..22429
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GJ18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21574.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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