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L3_079_000M1_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_450_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(673..1374)
DNA (702bp) protein (234aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF75_9FIRM
L3_079_000M1_scaffold_450_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1376..2401)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PK69_9FIRM
hypothetical protein
L3_079_000M1_scaffold_450_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2500..3411)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Ribonuclease Z n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF89_9FIRM
hypothetical protein
L3_079_000M1_scaffold_450_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3405..3635)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TZC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64326.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3632..4171)
DNA (540bp) protein (180aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5I7_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ64327.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4185..4904)
DNA (720bp) protein (240aa)
Universal bacterial protein YeaZ n=2 Tax=Clostridiales RepID=U2P139_9FIRM
Inactive homolog of metal-dependent proteases putative molecular chaperone {ECO:0000313|EMBL:CCZ64328.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_079_000M1_scaffold_450_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4901..5335)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TLV1_9FIRM
Hydrolase, P-loop family {ECO:0000313|EMBL:ERK44149.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_450_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5360..7510)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TF94_9FIRM
Tex-like protein {ECO:0000313|EMBL:ERK44148.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Transcriptional accessory protein
L3_079_000M1_scaffold_450_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7617..8099
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64331.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8094..8531)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJ19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK44146.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Protein of unknown function (DUF2752).
L3_079_000M1_scaffold_450_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8587..9324
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TF85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64333.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_12
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9485..10690)
DNA (1206bp) protein (402aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLV7_9FIRM
L3_079_000M1_scaffold_450_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10684..11895)
DNA (1212bp) protein (404aa)
Proposed homoserine kinase n=2 Tax=Clostridiales RepID=R5TF99_9FIRM
Proposed homoserine kinase {ECO:0000313|EMBL:CCZ64335.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
proposed homoserine kinase
L3_079_000M1_scaffold_450_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11980..13182)
DNA (1203bp) protein (401aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Homoserine dehydrogenase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZD6_9FIRM
homoserine dehydrogenase
L3_079_000M1_scaffold_450_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13189..13632)
DNA (444bp) protein (148aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein BN683_01406 n=2 Tax=Clostridiales RepID=R5U5K0_9FIRM
UPF0735 ACT domain-containing protein BN683_01406 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_079_000M1_scaffold_450_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13861..14709)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P130_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK44140.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Beta-propeller domains of methanol dehydrogenase type
L3_079_000M1_scaffold_450_17
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14725..15813)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64339.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_18
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15824..17083)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64340.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17099..18103)
DNA (1005bp) protein (335aa)
Peptide chain release factor 2 n=2 Tax=Clostridiales RepID=R5TZE1_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
bacterial peptide chain release factor 2 (bRF-2)
L3_079_000M1_scaffold_450_20
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18338..19708)
DNA (1371bp) protein (457aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Phosphoglucosamine mutase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJA4_9FIRM
CpsG; phosphomannomutase
L3_079_000M1_scaffold_450_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19762..21585)
DNA (1824bp) protein (608aa)
Adenylyl-sulfate kinase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P1A9_9FIRM
Adenylyl-sulfate kinase {ECO:0000313|EMBL:ERK44230.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CysN; GTPase
L3_079_000M1_scaffold_450_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21587..22480)
DNA (894bp) protein (298aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Sulfate adenylyltransferase subunit 2 2 n=2 Tax=Clostridiales RepID=R5TLW8_9FIRM
hypothetical protein
L3_079_000M1_scaffold_450_23
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22501..22764)
DNA (264bp) protein (88aa)
Phosphocarrier HPr family protein n=2 Tax=Clostridiales RepID=R5TFA9_9FIRM
Phosphocarrier HPr family protein {ECO:0000313|EMBL:CCZ64345.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
phosphocarrier HPr family protein
L3_079_000M1_scaffold_450_24
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22813..24108)
DNA (1296bp) protein (432aa)
YbbR-like protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QZR7_9FIRM
YbbR-like protein {ECO:0000313|EMBL:ERK44227.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
YbbR family protein
L3_079_000M1_scaffold_450_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24074..24982)
DNA (909bp) protein (303aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U5K9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ64347.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_26
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25024..26067)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64348.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_27
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26086..26466)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PKD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64349.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_450_28
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26630..27325)
DNA (696bp) protein (232aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFB6_9FIRM
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CCZ64350.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
ComFC; putative amidophosphoribosyltransferase
L3_079_000M1_scaffold_450_29
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27329..29533)
DNA (2205bp) protein (735aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Helicase RecD/TraA family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZF4_9FIRM
helicase, RecD/TraA family protein
L3_079_000M1_scaffold_450_30
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29587..30582)
DNA (996bp) protein (332aa)
Cell shape determining protein MreB/Mrl family n=2 Tax=Clostridiales RepID=R5U5L7_9FIRM
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CCZ64352.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
rod shape-determining protein MreB
Displaying items 1-30 of 43 in total

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