ggKbase home page

L3_079_000M1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_451_1
unknown

Not on your lists

554..670
DNA (117bp) protein (39aa)

This feature has no annotations

L3_079_000M1_scaffold_451_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

971..2719
DNA (1749bp) protein (583aa)
dnaX; DNA polymerase III gamma/tau subunit (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S686_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCZ46359.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_451_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

2735..3100
DNA (366bp) protein (122aa)
Nucleoid-associated protein BN483_01466 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZX5_9FIRM
Nucleoid-associated protein BN483_01466 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_451_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3741..4886)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46620.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_451_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(4898..6061)
DNA (1164bp) protein (388aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative glycoside hydrolase (EC:3.2.1.-)
Glycosyl hydrolase domain protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0Q5_9FIRM
L3_079_000M1_scaffold_451_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(6076..7950)
DNA (1875bp) protein (625aa)
Putative teichoic acid/polysaccharide phosphoglycerol transferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RX88_9FIRM
Putative teichoic acid/polysaccharide phosphoglycerol transferase {ECO:0000313|EMBL:CCZ45830.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
teichoic acid/polysaccharide phosphoglycerol transferase
L3_079_000M1_scaffold_451_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8065..8334
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=D3AQJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN33224.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_079_000M1_scaffold_451_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(8441..9889)
DNA (1449bp) protein (483aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Glycine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIT0_9FIRM
glycyl-tRNA synthetase
L3_079_000M1_scaffold_451_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(10869..12635)
DNA (1767bp) protein (589aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase AspS n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWV3_9FIRM
Aspartyl-tRNA synthetase AspS {ECO:0000313|EMBL:CCZ45700.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_451_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12711..13127)
DNA (417bp) protein (139aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SFZ0_9FIRM
Methylglyoxal synthase {ECO:0000313|EMBL:CCZ45701.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_451_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(13252..13992)
DNA (741bp) protein (247aa)
Site-determining protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SL94_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
minD; septum site-determining protein MinD
L3_079_000M1_scaffold_451_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(14025..14720)
DNA (696bp) protein (232aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
gidB; methyltransferase GidB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RY14_9FIRM
L3_079_000M1_scaffold_451_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14717..15154)
DNA (438bp) protein (146aa)
Large-conductance mechanosensitive channel n=2 Tax=Oscillibacter RepID=U2QD27_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Large-conductance mechanosensitive channel
L3_079_000M1_scaffold_451_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(15233..16537)
DNA (1305bp) protein (435aa)
Serine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWV8_9FIRM
Serine--tRNA ligase {ECO:0000313|EMBL:CCZ45705.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
serS; seryl-tRNA synthetase
L3_079_000M1_scaffold_451_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(16585..17133)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SFZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45706.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_451_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(17136..18020)
DNA (885bp) protein (295aa)
Chromosome partitioning protein ParB n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SL99_9FIRM
Chromosome partitioning protein ParB {ECO:0000313|EMBL:CCZ45707.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
parB; chromosome partitioning protein ParB
L3_079_000M1_scaffold_451_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(18079..18855)
DNA (777bp) protein (259aa)
Chromosome partitioning protein ParA n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RY20_9FIRM
Chromosome partitioning protein ParA {ECO:0000313|EMBL:CCZ45708.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
parA; chromosome partitioning protein ParA
L3_079_000M1_scaffold_451_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(19106..20986)
DNA (1881bp) protein (627aa)
putative glycoside hydrolase (EC:3.2.1.-)
Putative glycoside hydrolase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3Q6_9FIRM
Putative glycoside hydrolase {ECO:0000313|EMBL:CCX74885.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_079_000M1_scaffold_451_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(21050..23074)
DNA (2025bp) protein (675aa)
Penicillin-binding protein A n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHT9_9FIRM
Penicillin-binding protein A {ECO:0000313|EMBL:CCZ46296.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pbpA; penicillin-binding protein A
L3_079_000M1_scaffold_451_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23116..23625)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QC11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58962.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_451_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(23637..24476)
DNA (840bp) protein (280aa)
Cell shape-determining protein MreC n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZR1_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
mreC; putative rod shape-determining protein MreC
L3_079_000M1_scaffold_451_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(24513..25085)
DNA (573bp) protein (191aa)
Maf-like protein BN483_01408 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S626_9FIRM
Maf-like protein BN483_01408 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Maf-like protein
L3_079_000M1_scaffold_451_23
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(25147..27267)
DNA (2121bp) protein (707aa)
Peptidase U32 family n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYK1_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CCZ46300.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
peptidase U32 family protein
L3_079_000M1_scaffold_451_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27272..27589)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SHU5_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_451_25

Not on your lists

27775..28701
DNA (927bp) protein (309aa)
Primosome, DnaD subunit (Fragment) n=1 Tax=human gut metagenome RepID=K1T6P0_9ZZZZ
Primosome, DnaD subunit {ECO:0000313|EMBL:EKC63204.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_000M1_scaffold_451_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

28720..29709
DNA (990bp) protein (330aa)
DNA replication protein DnaC n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYJ6_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:CCZ46295.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_451_27

Not on your lists

comp(29767..30369)
DNA (603bp) protein (201aa)
Sisomicin resistance protein n=1 Tax=uncultured organism RepID=C8C193_9ZZZZ
Sisomicin resistance protein {ECO:0000313|EMBL:ACT97676.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_079_000M1_scaffold_451_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

30585..30959
DNA (375bp) protein (125aa)
atpE; ATP synthase F0 subunit C (EC:3.6.3.14)
ATP synthase F0 subunit C n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5E5D1
Uncharacterized protein {ECO:0000313|EMBL:ESL13706.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_079_000M1_scaffold_451_29
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

31195..32046
DNA (852bp) protein (284aa)
ATP synthase subunit a n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD76_9FIRM
ATP synthase subunit a {ECO:0000256|RuleBase:RU000483}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ATP synthase subunit A
L3_079_000M1_scaffold_451_30
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32066..32440
DNA (375bp) protein (125aa)
atpE; ATP synthase F0 subunit C (EC:3.6.3.14)
ATP synthase F0 subunit C n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5E5D1
Putative ATP synthase F0, C subunit {ECO:0000313|EMBL:EET61140.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Displaying items 1-30 of 48 in total

View Taxonomy