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L3_079_000M1_scaffold_452

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_452_1
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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305..844
DNA (540bp) protein (180aa)
rubrerythrin n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FA76ED
Rubredoxin {ECO:0000313|EMBL:CCX86263.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Rubrerythrin
L3_079_000M1_scaffold_452_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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1003..1869
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H8V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21367.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
xylose isomerase domain-containing protein
L3_079_000M1_scaffold_452_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2171..3007
DNA (837bp) protein (279aa)
Nucleotide-binding protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZLK9_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDD31337.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ParA/MinD-like ATPase
L3_079_000M1_scaffold_452_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3632..5956
DNA (2325bp) protein (775aa)
Acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A662_9CLOT
Acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases {ECO:0000313|EMBL:CCX38388.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
L3_079_000M1_scaffold_452_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6119..7054
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ARH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41796.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_079_000M1_scaffold_452_6
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7200..8048
DNA (849bp) protein (283aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7M8Y7_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
tagG; teichoic acid translocation permease
L3_079_000M1_scaffold_452_7
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8062..8793
DNA (732bp) protein (244aa)
O-antigen export system ATP-binding protein RfbB n=1 Tax=Clostridium sp. CAG:571 RepID=R5XQ38_9CLOT
O-antigen export system ATP-binding protein RfbB {ECO:0000313|EMBL:CDA16765.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
ABC transporter ATP-binding component
L3_079_000M1_scaffold_452_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8833..9342
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY00_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97426.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_000M1_scaffold_452_9
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9428..9802
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=3 Tax=Lachnospiraceae RepID=F3ABY4_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEX21103.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
endoribonuclease L-PSP, putative
L3_079_000M1_scaffold_452_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9904..11229)
DNA (1326bp) protein (442aa)
PF01594 domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABF6_9CLOT
PF01594 domain protein {ECO:0000313|EMBL:CCX38402.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
conserved membrane protein of unknown function
L3_079_000M1_scaffold_452_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11399..12364)
DNA (966bp) protein (322aa)
Oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AEX3_9CLOT
Oxidoreductase domain protein {ECO:0000313|EMBL:CCX37911.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
oxidoreductase domain-containing protein
L3_079_000M1_scaffold_452_12
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(12388..12759)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29455.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_079_000M1_scaffold_452_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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13084..14364
DNA (1281bp) protein (427aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV id=4206713 bin=GWF2_Clostridiales_36_10 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_079_000M1_scaffold_452_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14380..15696
DNA (1317bp) protein (439aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A951_9CLOT
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:CCX38409.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
radical SAM protein
L3_079_000M1_scaffold_452_15
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15675..16433
DNA (759bp) protein (253aa)
Uncharacterized protein n=5 Tax=Pelosinus fermentans RepID=I8S0L3_9FIRM
DNA metabolism protein, putative {ECO:0000313|EMBL:EIW15542.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
DNA metabolism protein, putative
L3_079_000M1_scaffold_452_16
unknown

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comp(16497..17096)
DNA (600bp) protein (200aa)

This feature has no annotations

L3_079_000M1_scaffold_452_17
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17229..18824)
DNA (1596bp) protein (532aa)
Monogalactosyldiacylglycerol synthase C-terminal domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5P6_9CLOT
Monogalactosyldiacylglycerol synthase C-terminal domain protein {ECO:0000313|EMBL:CCX38435.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
UDP-glucuronosyltransferase
L3_079_000M1_scaffold_452_18
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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19060..20799
DNA (1740bp) protein (580aa)
VanW-like protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAN6_9FIRM
VanW-like protein {ECO:0000313|EMBL:CDD30980.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Uncharacterized vancomycin resistance protein
L3_079_000M1_scaffold_452_19
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20900..22798
DNA (1899bp) protein (633aa)
NAD+ synthetase (EC:6.3.5.1)
Putative NAD+ synthetase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6A8_9CLOT
Putative NAD+ synthetase {ECO:0000313|EMBL:CCX38438.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_079_000M1_scaffold_452_20
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22813..23745
DNA (933bp) protein (311aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A989_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:CCX38439.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L3_079_000M1_scaffold_452_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23752..24897
DNA (1146bp) protein (382aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5Q0_9CLOT
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CCX38440.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_079_000M1_scaffold_452_22
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24930..26096
DNA (1167bp) protein (389aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGG4_9CLOT
thiazole biosynthesis/tRNA modification protein ThiI
L3_079_000M1_scaffold_452_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26114..27367
DNA (1254bp) protein (418aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6B4_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
competence/damage-inducible protein CinA
L3_079_000M1_scaffold_452_24
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27401..28417
DNA (1017bp) protein (339aa)
Sortase SrtB family n=1 Tax=Clostridium sp. CAG:557 RepID=R6GPG5_9CLOT
Sortase SrtB family {ECO:0000313|EMBL:CDB23569.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
sortase, SrtB family
L3_079_000M1_scaffold_452_25
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(28496..30376)
DNA (1881bp) protein (627aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXA1_9FIRM
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:CDB86791.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_079_000M1_scaffold_452_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30499..30717)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EBP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30384.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Cation transport ATPase
L3_079_000M1_scaffold_452_27
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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30895..31704
DNA (810bp) protein (270aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU88_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY43884.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ArsR family transcriptional regulator
L3_079_000M1_scaffold_452_28
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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31789..32028
DNA (240bp) protein (80aa)
serine/threonine protein kinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030FC22A
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADU21373.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_079_000M1_scaffold_452_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32141..33541
DNA (1401bp) protein (467aa)
Putative efflux protein MATE family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGD1_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY90770.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_452_30
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33650..34309)
DNA (660bp) protein (220aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGG8_9CLOT
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCX38446.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Displaying items 1-30 of 45 in total

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