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L3_079_000M1_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_474_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

255..1196
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZW69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15716.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
dioxygenase
L3_079_000M1_scaffold_474_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1315..2565)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Parabacteroides RepID=A7AG05_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDN86061.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RND family efflux transporter MFP subunit
L3_079_000M1_scaffold_474_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2601..3935)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJ11_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15714.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
outer membrane efflux protein
L3_079_000M1_scaffold_474_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4268..5623
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A4D1_9PORP
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDD11314.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L3_079_000M1_scaffold_474_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5623..6942
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=A7AG01_9PORP
two-component system sensor histidine kinase
L3_079_000M1_scaffold_474_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7117..8370
DNA (1254bp) protein (418aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=3 Tax=Parabacteroides RepID=A7AG00_9PORP
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EDN86056.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Mn2+ and Fe2+ transport protein
L3_079_000M1_scaffold_474_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8779..10521
DNA (1743bp) protein (581aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=3 Tax=Parabacteroides RepID=A7AFZ7_9PORP
L3_079_000M1_scaffold_474_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10600..12042
DNA (1443bp) protein (481aa)
Tetratricopeptide repeat protein n=3 Tax=Parabacteroides RepID=A7AFZ6_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD11318.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N-acetylglucosamine transferase
L3_079_000M1_scaffold_474_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12045..12953
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11319.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_474_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13037..13738)
DNA (702bp) protein (234aa)
6-phosphogluconolactonase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPM8_9PORP
6-phosphogluconolactonase {ECO:0000313|EMBL:CDD11320.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
6-phosphogluconolactonase
L3_079_000M1_scaffold_474_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13754..15223)
DNA (1470bp) protein (490aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Parabacteroides RepID=A7AFZ3_9PORP
glucose-6-phosphate 1-dehydrogenase
L3_079_000M1_scaffold_474_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15474..16967)
DNA (1494bp) protein (498aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYL4_9PORP
6-phosphogluconate dehydrogenase
L3_079_000M1_scaffold_474_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17140..18285
DNA (1146bp) protein (382aa)
Glycerate kinase n=2 Tax=Parabacteroides merdae RepID=A7AFZ1_9PORP
Glycerate kinase {ECO:0000313|EMBL:EDN86047.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycerate kinase
L3_079_000M1_scaffold_474_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18298..19110
DNA (813bp) protein (271aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides merdae RepID=A7AFZ0_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN86046.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_079_000M1_scaffold_474_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19185..19586
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase family protein n=4 Tax=Parabacteroides RepID=A7AFY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15701.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
general stress protein
L3_079_000M1_scaffold_474_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19598..20530)
DNA (933bp) protein (311aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Parabacteroides RepID=A7AFY8_9PORP
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD11327.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_079_000M1_scaffold_474_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20537..20920)
DNA (384bp) protein (128aa)
GtrA-like protein n=3 Tax=Parabacteroides RepID=A7AFY7_9PORP
GtrA-like protein {ECO:0000313|EMBL:EDN86043.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
GtrA family protein
L3_079_000M1_scaffold_474_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20892..21650)
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86042.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000M1_scaffold_474_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21800..22801)
DNA (1002bp) protein (334aa)
Fatty acid elongase 3-ketoacyl-CoA synthase 1 n=2 Tax=Parabacteroides merdae RepID=A7AFY4_9PORP
Fatty acid elongase 3-ketoacyl-CoA synthase 1 {ECO:0000313|EMBL:EDN86040.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
integral membrane protein
L3_079_000M1_scaffold_474_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22809..23825)
DNA (1017bp) protein (339aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPQ3_9PORP
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CDD11340.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
nucleoside hydrolase
L3_079_000M1_scaffold_474_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23851..24780)
DNA (930bp) protein (310aa)
Ribokinase n=3 Tax=Parabacteroides RepID=A7AFY2_9PORP
Ribokinase {ECO:0000313|EMBL:EDN86038.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ribokinase
L3_079_000M1_scaffold_474_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24945..26492
DNA (1548bp) protein (516aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYN5_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD11342.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000M1_scaffold_474_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26747..27715
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11343.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alpha/beta hydrolase
L3_079_000M1_scaffold_474_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27959..29914)
DNA (1956bp) protein (652aa)
Carbohydrate binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFX7_9PORP
Carbohydrate binding domain protein {ECO:0000313|EMBL:EDN86033.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-L-arabinofuranosidase
L3_079_000M1_scaffold_474_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30104..31183
DNA (1080bp) protein (360aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Aldose 1-epimerase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZW41_9PORP
aldose 1-epimerase
L3_079_000M1_scaffold_474_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31223..32479
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=3 Tax=Parabacteroides RepID=A7AFX5_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN86031.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
major facilitator superfamily MFS_1
L3_079_000M1_scaffold_474_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32570..33715
DNA (1146bp) protein (382aa)
Galactokinase n=3 Tax=Parabacteroides RepID=A7AFX4_9PORP
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
galactokinase
L3_079_000M1_scaffold_474_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33745..34437
DNA (693bp) protein (231aa)
Hydrolase, NUDIX family n=4 Tax=Parabacteroides RepID=A7AFX3_9PORP
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN86029.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000M1_scaffold_474_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34773..36800
DNA (2028bp) protein (676aa)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJN9_9PORP
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDD11353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transketolase
L3_079_000M1_scaffold_474_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36903..37334
DNA (432bp) protein (144aa)
Ribose-5-phosphate isomerase B n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWN7_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDD11354.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribose 5-phosphate isomerase B
Displaying items 1-30 of 44 in total

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