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L3_079_000M1_scaffold_483

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_483_1
unknown

Not on your lists

comp(196..333)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_079_000M1_scaffold_483_2
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(824..1390)
DNA (567bp) protein (189aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Glutamine amidotransferase subunit PdxT n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U6_9FIRM
SNO glutamine amidotransferase
L3_079_000M1_scaffold_483_3
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1392..2267)
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U5_9FIRM
L3_079_000M1_scaffold_483_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2417..2623)
DNA (207bp) protein (69aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U4_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EDM52335.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_483_5
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3081..4739)
DNA (1659bp) protein (553aa)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U2_9FIRM
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:EDM52333.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
phosphoribulokinase/uridine kinase
L3_079_000M1_scaffold_483_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4732..5424)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52332.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Predicted SAM-dependent methyltransferase
L3_079_000M1_scaffold_483_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5451..7214)
DNA (1764bp) protein (588aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNA primase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U0_9FIRM
DNA primase
L3_079_000M1_scaffold_483_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7241..8251)
DNA (1011bp) protein (337aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3T9_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9163..9804)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52328.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9804..12050)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52327.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L3_079_000M1_scaffold_483_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12034..13050)
DNA (1017bp) protein (339aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3T5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM52326.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ABC-type multidrug transport system, ATPase component
L3_079_000M1_scaffold_483_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13342..14715)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3T4_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Na+-dependent transporters of the SNF family
L3_079_000M1_scaffold_483_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14792..15148)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=root RepID=A5Z3T3_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L20P
L3_079_000M1_scaffold_483_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15171..15368)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=root RepID=A5Z3T2_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L35P
L3_079_000M1_scaffold_483_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15399..15893)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=2 Tax=root RepID=A5Z3T1_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
bacterial translation initiation factor 3 (bIF-3)
L3_079_000M1_scaffold_483_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16297..16626)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52320.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_483_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16761..18764)
DNA (2004bp) protein (668aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=3 Tax=root RepID=A5Z3S8_9FIRM
L3_079_000M1_scaffold_483_18
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19070..20308)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z3S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52318.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20508..21962)
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3S6_9FIRM
L3_079_000M1_scaffold_483_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22186..22680)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52316.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_483_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22696..24345)
DNA (1650bp) protein (550aa)
DAK2 domain fusion protein YloV n=2 Tax=root RepID=A5Z3S4_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EDM52315.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DAK2 domain fusion protein YloV
L3_079_000M1_scaffold_483_22
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24372..24731)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52314.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_483_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24872..25057)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3E7_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
LSU ribosomal protein L28P
L3_079_000M1_scaffold_483_24
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25153..27573)
DNA (2421bp) protein (807aa)
metH; Methionine synthase (EC:2.1.1.13)
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3E1_9FIRM
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EDM52536.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_25
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27551..28228)
DNA (678bp) protein (226aa)
Vitamin B12 dependent methionine synthase, activation domain. (EC:2.1.1.13)
Vitamin B12 dependent methionine synthase, activation domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3E0_9FIRM
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EDM52535.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28230..29108)
DNA (879bp) protein (293aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3D9_9FIRM
L3_079_000M1_scaffold_483_27

Not on your lists

comp(29332..29709)
DNA (378bp) protein (126aa)
Sporulation protein YtfJ n=2 Tax=root RepID=A5Z3D8_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:EKC50895.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_000M1_scaffold_483_28
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29722..30750)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52532.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_079_000M1_scaffold_483_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30754..31095)
DNA (342bp) protein (114aa)
Conserved domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3D6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDM52531.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_079_000M1_scaffold_483_30
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31137..32525)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52530.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
Displaying items 1-30 of 47 in total

View Taxonomy