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L3_079_000M1_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_484_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..312)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SA87_9BACE
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXY41157.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_079_000M1_scaffold_484_2
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1026..2114
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IFE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES70192.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
DNA gyrase inhibitor
L3_079_000M1_scaffold_484_3
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2135..2605
DNA (471bp) protein (157aa)
Bacterial transcription activator n=2 Tax=Bacteroides RepID=R7KNH9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS02309.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_079_000M1_scaffold_484_4
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2718..3785)
DNA (1068bp) protein (356aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KJF8_9BACE
ATP GTP-binding protein
L3_079_000M1_scaffold_484_5
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4069..4839)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IJ67_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02400.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_079_000M1_scaffold_484_6
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4921..6312)
DNA (1392bp) protein (464aa)
Xylanase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IJ66_9BACE
xylanase
Putative xylanase {ECO:0000313|EMBL:AAO76299.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6404..7759
DNA (1356bp) protein (452aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A8H4_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO76300.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_8
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7905..8621
DNA (717bp) protein (239aa)
Outer membrane protein, OmpA family n=4 Tax=Bacteroides RepID=Q8A8H3_BACTN
OmpA family outer membrane protein
Lipoprotein PG3 {ECO:0000313|EMBL:EFI02397.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_079_000M1_scaffold_484_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8599..9345
DNA (747bp) protein (249aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=2 Tax=Bacteroides RepID=D7IJ63_9BACE
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L3_079_000M1_scaffold_484_10
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9433..11208)
DNA (1776bp) protein (592aa)
Oxaloacetate decarboxylase n=2 Tax=Bacteroides RepID=R7KLB7_9BACE
Oxaloacetate decarboxylase {ECO:0000313|EMBL:CDE76508.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
pyruvate carboxylase subunit B
L3_079_000M1_scaffold_484_11
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11418..11921)
DNA (504bp) protein (168aa)
RNA polymerase ECF-type sigma factor n=6 Tax=Bacteroides RepID=Q8A8H0_BACTN
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDE76507.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_484_12
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12164..12724
DNA (561bp) protein (187aa)
LemA protein n=5 Tax=Bacteroides RepID=Q8A8G9_BACTN
LemA protein
LemA protein {ECO:0000313|EMBL:CDE76506.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_484_13
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12737..13699
DNA (963bp) protein (321aa)
Zn-dependent protease with chaperone function n=3 Tax=Bacteroides RepID=D7IJ59_9BACE
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:EFI02392.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
protease
L3_079_000M1_scaffold_484_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13795..14289
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A8G7_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS02320.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_484_15
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14295..14924)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HEV6_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS02321.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_079_000M1_scaffold_484_16
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15007..16092
DNA (1086bp) protein (362aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=3 Tax=Bacteroides RepID=R7KNG0_9BACE
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EOS02322.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_484_17
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16435..16524
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I0PZP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE76500.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_484_18
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16508..19084
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KLA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE76498.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L3_079_000M1_scaffold_484_19
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19089..20357
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IFC8_9BACE
recombination factor protein RarA
Putative ATPase, AAA family {ECO:0000313|EMBL:AAO76312.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_20
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20409..20756
DNA (348bp) protein (116aa)
Four helix bundle protein n=2 Tax=Bacteroides RepID=R9HEW1_BACT4
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02386.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_079_000M1_scaffold_484_21
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20786..21742
DNA (957bp) protein (319aa)
Glycerate dehydrogenase n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KJD3_9BACE
Glycerate dehydrogenase {ECO:0000313|EMBL:CDE76495.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
glycerate dehydrogenase
L3_079_000M1_scaffold_484_22
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21893..23035)
DNA (1143bp) protein (381aa)
Cytochrome D ubiquinol oxidase, subunit II n=3 Tax=Bacteroides RepID=D7IJ51_9BACE
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EOS02328.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
cytochrome D ubiquinol oxidase subunit II
L3_079_000M1_scaffold_484_23
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23190..24752)
DNA (1563bp) protein (521aa)
Cytochrome D ubiquinol oxidase subunit I n=4 Tax=Bacteroides RepID=Q8A8F7_BACTN
cytochrome D ubiquinol oxidase subunit I
Cytochrome d ubiquinol oxidase subunit I {ECO:0000313|EMBL:EOS02329.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_484_24
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24773..25009)
DNA (237bp) protein (79aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A8F6_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE76492.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_484_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25081..25230
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PZP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS02331.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_079_000M1_scaffold_484_26
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25235..26626
DNA (1392bp) protein (464aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IJ48_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EFI02381.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
outer membrane efflux protein
L3_079_000M1_scaffold_484_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26678..27907
DNA (1230bp) protein (410aa)
Periplasmic component of efflux system n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A8F4_BACTN
periplasmic protein of efflux system
Periplasmic component of efflux system {ECO:0000313|EMBL:AAO76320.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_28
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27914..28657
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides RepID=D7IJ46_9BACE
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AAO76321.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28747..29967
DNA (1221bp) protein (407aa)
ABC transporter, permease protein n=4 Tax=Bacteroides RepID=Q8A8F2_BACTN
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AAO76322.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_484_30
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29986..31059
DNA (1074bp) protein (358aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6IFB7_9BACE
two-component system sensor
Two-component system sensor, histidine kinase {ECO:0000313|EMBL:EFI02377.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Displaying items 1-30 of 88 in total

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