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L3_079_000M1_scaffold_519

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_519_1
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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264..1568
DNA (1305bp) protein (435aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. D5 RepID=F0Z5V1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGG84064.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_519_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1722..2597
DNA (876bp) protein (292aa)
Ser/Thr phosphatase family protein n=5 Tax=Clostridiales RepID=A5KLA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25948.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted phosphohydrolases
L3_079_000M1_scaffold_519_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2825..3583
DNA (759bp) protein (253aa)
Segregation and condensation protein A n=5 Tax=Clostridiales RepID=A5KLA1_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
segregation and condensation protein A
L3_079_000M1_scaffold_519_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3573..4142
DNA (570bp) protein (190aa)
Segregation and condensation protein B n=5 Tax=Clostridiales RepID=A5KLA2_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
segregation and condensation protein B
L3_079_000M1_scaffold_519_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4324..5604
DNA (1281bp) protein (427aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLA3_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDK24741.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_079_000M1_scaffold_519_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5740..7734
DNA (1995bp) protein (665aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=5 Tax=Clostridiales RepID=A5KLA4_9FIRM
L3_079_000M1_scaffold_519_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7781..8005
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JD57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84583.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_519_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8065..10518
DNA (2454bp) protein (818aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QYX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25942.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
surface/cell-adhesion protein
L3_079_000M1_scaffold_519_9
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10543..10665
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QUM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84581.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_519_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10842..11270
DNA (429bp) protein (143aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QB50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25940.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_519_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11402..12124
DNA (723bp) protein (241aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25939.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_519_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12182..12448
DNA (267bp) protein (89aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20306.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000M1_scaffold_519_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12562..14001
DNA (1440bp) protein (480aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:6.4.1.3)
Carboxyl transferase domain protein n=5 Tax=Clostridiales RepID=A5KLB1_9FIRM
Methylmalonyl-CoA decarboxylase {ECO:0000313|EMBL:EFV20307.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_519_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14016..14795
DNA (780bp) protein (260aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Oxaloacetate decarboxylase gamma chain n=5 Tax=Clostridiales RepID=E5XED5_9FIRM
sodium pump decarboxylases, gamma subunit
L3_079_000M1_scaffold_519_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14814..15182
DNA (369bp) protein (123aa)
Biotin-requiring enzyme n=5 Tax=Clostridiales RepID=A5KLB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26980.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Biotin carboxyl carrier protein
L3_079_000M1_scaffold_519_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15206..16357
DNA (1152bp) protein (384aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3 4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=5 Tax=Clostridiales RepID=A5KLB4_9FIRM
Glutaconyl-CoA decarboxylase {ECO:0000313|EMBL:EFV20310.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_519_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16376..17791
DNA (1416bp) protein (472aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Conserved carboxylase domain protein n=5 Tax=Clostridiales RepID=A5KLB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26978.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000M1_scaffold_519_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17915..19714
DNA (1800bp) protein (600aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Metallopeptidase family M24 protein n=3 Tax=Clostridiales RepID=E5XED9_9FIRM
Metallopeptidase family M24 protein {ECO:0000313|EMBL:EFV20312.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000M1_scaffold_519_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19805..20740
DNA (936bp) protein (312aa)
SIS domain protein n=5 Tax=Clostridiales RepID=A5KLB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26976.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Transcriptional regulators
L3_079_000M1_scaffold_519_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20733..21989
DNA (1257bp) protein (419aa)
Flavoprotein family protein n=4 Tax=Clostridiales RepID=A5KLB8_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CCZ26975.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
conserved hypothetical protein TIGR00275
L3_079_000M1_scaffold_519_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22020..22676
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=3 Tax=Clostridiales RepID=A5KLC0_9FIRM
L3_079_000M1_scaffold_519_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22692..23543
DNA (852bp) protein (284aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Clostridiales RepID=E5XEE3_9FIRM
L3_079_000M1_scaffold_519_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23524..24627
DNA (1104bp) protein (368aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R1V7_9FIRM
Putative ribosomal protein S1 {ECO:0000313|EMBL:EDK24760.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Ribosomal protein S1
L3_079_000M1_scaffold_519_24
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24866..26185
DNA (1320bp) protein (440aa)
Electron transport complex, RnfABCDGE type, C subunit n=5 Tax=Clostridiales RepID=A5KLC3_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
electron transport complex, RnfABCDGE type, C subunit
L3_079_000M1_scaffold_519_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26204..27136
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QE43_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit
L3_079_000M1_scaffold_519_26
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27136..27744
DNA (609bp) protein (203aa)
Electron transport complex, RnfABCDGE type, G subunit n=5 Tax=Clostridiales RepID=A5KLC5_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
electron transport complex, RnfABCDGE type, G subunit
L3_079_000M1_scaffold_519_27
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27737..28474
DNA (738bp) protein (246aa)
Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Lachnospiraceae RepID=A5KLC6_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
electron transport complex, RnfABCDGE type, E subunit
L3_079_000M1_scaffold_519_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28475..29086
DNA (612bp) protein (204aa)
Electron transport complex, RnfABCDGE type, A subunit n=5 Tax=Clostridiales RepID=A5KLC7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
electron transport complex, RnfABCDGE type, A subunit
L3_079_000M1_scaffold_519_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29100..29906
DNA (807bp) protein (269aa)
Electron transport complex, RnfABCDGE type, B subunit n=5 Tax=Clostridiales RepID=A5KLC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26966.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
electron transport complex, RnfABCDGE type, B subunit
L3_079_000M1_scaffold_519_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29968..30324
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20324.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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