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L3_079_000M1_scaffold_525

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_525_1
unknown

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2..112
DNA (111bp) protein (37aa)

This feature has no annotations

L3_079_000M1_scaffold_525_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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145..1371
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AY02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82165.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_525_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1373..3169)
DNA (1797bp) protein (599aa)
Regulatory protein blaR1 n=4 Tax=Lachnospiraceae RepID=E5XGK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82164.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Beta-lactamase
L3_079_000M1_scaffold_525_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3171..3557)
DNA (387bp) protein (129aa)
Penicillinase repressor n=4 Tax=Lachnospiraceae RepID=A5KKY1_9FIRM
Methicillin-resistance regulatory protein MecI {ECO:0000313|EMBL:EFV19575.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
penicillinase repressor
L3_079_000M1_scaffold_525_5
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3960..7064
DNA (3105bp) protein (1035aa)
Conserved domain protein n=3 Tax=Lachnospiraceae RepID=A5KKX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82162.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_525_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7058..7204
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A5KKX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82161.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_525_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7257..7874
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KKX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25078.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_079_000M1_scaffold_525_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8559..10547
DNA (1989bp) protein (663aa)
UvrABC system protein B n=4 Tax=Lachnospiraceae RepID=A5KKX4_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
excinuclease ABC, B subunit
L3_079_000M1_scaffold_525_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10591..13428
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QJQ2_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
excinuclease ABC, A subunit
L3_079_000M1_scaffold_525_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13682..14671
DNA (990bp) protein (330aa)
Cell shape determining protein, MreB/Mrl family n=5 Tax=Clostridiales RepID=A5KKX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26503.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
rod shape-determining protein MreB
L3_079_000M1_scaffold_525_11
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14797..17025
DNA (2229bp) protein (743aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family Helicase n=5 Tax=Clostridiales RepID=E5XGL3_9FIRM
L3_079_000M1_scaffold_525_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17130..17705
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AXZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82155.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Predicted amidophosphoribosyltransferases
L3_079_000M1_scaffold_525_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17763..18200
DNA (438bp) protein (146aa)
Conserved domain protein n=5 Tax=Clostridiales RepID=A5KKW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19585.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000M1_scaffold_525_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18203..19261
DNA (1059bp) protein (353aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KKW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26499.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_525_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19294..20157
DNA (864bp) protein (288aa)
TIGR00159 family protein n=5 Tax=Clostridiales RepID=A5KKW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19587.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
conserved hypothetical protein TIGR00159
L3_079_000M1_scaffold_525_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20154..21446
DNA (1293bp) protein (431aa)
YbbR-like protein n=3 Tax=Clostridiales RepID=A5KKW5_9FIRM
YbbR-like protein {ECO:0000313|EMBL:CCZ26497.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000M1_scaffold_525_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21533..21805
DNA (273bp) protein (91aa)
Phosphocarrier, HPr family n=5 Tax=Clostridiales RepID=A5KKW4_9FIRM
Phosphocarrier HPr family {ECO:0000313|EMBL:CCZ26496.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Phosphotransferase System HPr (HPr) Family
L3_079_000M1_scaffold_525_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21843..22754
DNA (912bp) protein (304aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26495.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
dTDP-glucose pyrophosphorylase
L3_079_000M1_scaffold_525_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22816..24360
DNA (1545bp) protein (515aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AXY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82148.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
cell envelope-related function transcriptional attenuator common domain
L3_079_000M1_scaffold_525_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24674..26491
DNA (1818bp) protein (606aa)
Arylsulfatase n=2 Tax=Clostridiales RepID=A5KKW1_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CCZ26493.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_079_000M1_scaffold_525_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26627..27220
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5R0I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82146.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Sporulation and spore germination.
L3_079_000M1_scaffold_525_22
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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27281..31903
DNA (4623bp) protein (1541aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82145.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
N-acetylmuramoyl-L-alanine amidase
L3_079_000M1_scaffold_525_23
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31903..32058
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KKV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82144.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_525_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32048..32851
DNA (804bp) protein (268aa)
ABC-2 type transporter n=5 Tax=Clostridiales RepID=A5KKV4_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC-2 type transporter
L3_079_000M1_scaffold_525_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32868..33623
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KKV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27191.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_079_000M1_scaffold_525_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33660..35042
DNA (1383bp) protein (461aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KKV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82141.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000M1_scaffold_525_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35056..36084
DNA (1029bp) protein (343aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QF42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27193.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
family 2 glycosyl transferase
L3_079_000M1_scaffold_525_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36084..37358
DNA (1275bp) protein (425aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KKV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82139.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_525_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37383..38501
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine 2-epimerase n=5 Tax=Clostridiales RepID=A5KKU9_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCZ27195.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
UDP-N-acetylglucosamine 2-epimerase
L3_079_000M1_scaffold_525_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38515..39798
DNA (1284bp) protein (428aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KKU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19601.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative LPS biosynthesis protein
Displaying items 1-30 of 37 in total

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