ggKbase home page

L3_079_000M1_scaffold_534

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_534_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(146..1282)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4N7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS45408.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
permease
L3_079_000M1_scaffold_534_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1293..1820)
DNA (528bp) protein (176aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Thymidine kinase n=6 Tax=Bacteroides RepID=KITH_BACV8
thymidine kinase
L3_079_000M1_scaffold_534_3
unknown

Not on your lists

1930..2025
DNA (96bp) protein (32aa)

This feature has no annotations

L3_079_000M1_scaffold_534_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2043..2771
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Bacteroides RepID=C3RDJ2_9BACE
methyltransferase
L3_079_000M1_scaffold_534_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2800..3648
DNA (849bp) protein (283aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1E9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY80630.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_534_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3724..4413
DNA (690bp) protein (230aa)
TIGR02254 family HAD hydrolase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HGJ0_BACVU
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EOS03044.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
haloacid dehalogenase-like hydrolase
L3_079_000M1_scaffold_534_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4564..6039)
DNA (1476bp) protein (492aa)
Tetratricopeptide repeat protein n=5 Tax=Bacteroides RepID=C6Z6B9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY80628.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_534_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6068..8905)
DNA (2838bp) protein (946aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z6B8_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET16427.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_534_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9089..10585)
DNA (1497bp) protein (499aa)
SusD family protein n=6 Tax=Bacteroides RepID=C6ZBW8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR96823.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_534_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10598..13426)
DNA (2829bp) protein (943aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides RepID=R9H6M6_BACVU
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS44575.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
TonB-dependent receptor
L3_079_000M1_scaffold_534_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14101..15261)
DNA (1161bp) protein (387aa)
Site-specific recombinase, phage integrase family n=5 Tax=Bacteroides RepID=C6ZBX0_9BACE
Phage integrase family protein {ECO:0000313|EMBL:KDS23382.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
tyrosine type site-specific recombinase
L3_079_000M1_scaffold_534_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15629..18805
DNA (3177bp) protein (1059aa)
SusC/RagA family TonB-linked outer membrane protein n=8 Tax=Bacteroides RepID=I9QUZ5_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY33318.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L3_079_000M1_scaffold_534_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18830..20371
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9GYD4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR96827.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_534_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20396..21184
DNA (789bp) protein (263aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L1F6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR96828.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_534_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22203..25175
DNA (2973bp) protein (991aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1G5_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR39529.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_079_000M1_scaffold_534_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25199..26785
DNA (1587bp) protein (529aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9A1E5_BACVU
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS23330.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000M1_scaffold_534_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26877..28130
DNA (1254bp) protein (418aa)
GTPase HflX n=7 Tax=Bacteroides RepID=A6L1G7_BACV8
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_534_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28144..30129
DNA (1986bp) protein (662aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z4V3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03770.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_534_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30277..32124)
DNA (1848bp) protein (616aa)
Hydrolase CocE/NonD family protein n=4 Tax=Bacteroides RepID=C6Z4V2_9BACE
Glutaryl-7-ACA acylase {ECO:0000313|EMBL:EFV65957.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glutaryl-7-ACA acylase
L3_079_000M1_scaffold_534_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32263..33906
DNA (1644bp) protein (548aa)
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:KDS42639.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KDS42639.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Anaerobic fumarate hydratase class I n=7 Tax=Bacteroides RepID=A6L1H0_BACV8
anaerobic fumarate hydratase class I
L3_079_000M1_scaffold_534_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34012..36165
DNA (2154bp) protein (718aa)
Glycoside hydrolase family 89 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1H1_BACV8
glycoside hydrolase
Glycoside hydrolase family 89 {ECO:0000313|EMBL:ABR39535.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_534_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36338..37996)
DNA (1659bp) protein (553aa)
Cationic amino acid transporter n=4 Tax=Bacteroides RepID=A6L1H2_BACV8
cationic amino acid transporter
APA family basic amino acid/polyamine antiporter {ECO:0000313|EMBL:EOS03766.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_534_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38085..39404)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein n=5 Tax=Bacteroides RepID=D4V4R5_BACVU
outer membrane protein TolC
Uncharacterized protein {ECO:0000313|EMBL:EOS03765.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_534_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39401..42436)
DNA (3036bp) protein (1012aa)
RND transporter, HAE1 family n=4 Tax=Bacteroides RepID=C6Z4U7_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:CDF17958.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
multidrug efflux membrane fusion protein
L3_079_000M1_scaffold_534_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42456..43532)
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=5 Tax=Bacteroides RepID=C6Z4U6_9BACE
membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY81561.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_534_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43619..44638)
DNA (1020bp) protein (340aa)
Aminopeptidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L1H6_BACV8
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:ABR39540.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_534_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44652..45584)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Putative ribosome biogenesis GTPase RsgA n=6 Tax=root RepID=RSGA_BACV8
ribosome-associated GTPase
L3_079_000M1_scaffold_534_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45607..45696
DNA (90bp) protein (30aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UMH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03760.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_534_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45705..46265)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=14 Tax=Bacteroides RepID=RRF_BACV8
ribosome-recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_534_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46504..48084
DNA (1581bp) protein (527aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L1H9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17952.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying items 1-30 of 98 in total

View Taxonomy