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L3_079_000M1_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_543_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..3579)
DNA (3579bp) protein (1193aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL41060.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL41060.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB8_9FIRM
L3_079_000M1_scaffold_543_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3835..5010)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41059.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5366..7216)
DNA (1851bp) protein (617aa)
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBL41058.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB6_9FIRM
L3_079_000M1_scaffold_543_4
unknown

Not on your lists

7516..7668
DNA (153bp) protein (51aa)

This feature has no annotations

L3_079_000M1_scaffold_543_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7972..9069
DNA (1098bp) protein (366aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB4_9FIRM
ABC-type uncharacterized transport system, periplasmic component
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CBL41056.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9363..10253
DNA (891bp) protein (297aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB3_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:CBL41055.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10246..11019
DNA (774bp) protein (258aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB2_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CBL41054.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11345..12724)
DNA (1380bp) protein (460aa)
Putative efflux protein, MATE family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB1_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL41053.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14219..14995)
DNA (777bp) protein (259aa)
Transcriptional regulator, IclR family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTB0_9FIRM
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CBL41052.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15140..16963)
DNA (1824bp) protein (608aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBL41050.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Transcription termination factor Rho n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTA8_9FIRM
transcription termination factor Rho
L3_079_000M1_scaffold_543_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17368..18702)
DNA (1335bp) protein (445aa)
ATPase related to the helicase subunit of the Holliday junction resolvase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTA7_9FIRM
ATPase related to the helicase subunit of the Holliday junction resolvase
ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:CBL41049.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_12
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18796..19623)
DNA (828bp) protein (276aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5F3_9CLOT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CCY11104.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted xylanase/chitin deacetylase
L3_079_000M1_scaffold_543_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20415..21098
DNA (684bp) protein (228aa)
Uncharacterized protein conserved in bacteria n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTA4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL41046.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_14
unknown

Not on your lists

comp(21027..21206)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_079_000M1_scaffold_543_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21211..22875)
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTA3_9FIRM
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBL41045.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22989..23948)
DNA (960bp) protein (320aa)
Threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase {ECO:0000313|EMBL:CBL41044.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBL41044.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Threonine dehydratase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTA2_9FIRM
L3_079_000M1_scaffold_543_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24069..24878)
DNA (810bp) protein (270aa)
Predicted amidohydrolase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT47_9FIRM
Predicted amidohydrolase
Predicted amidohydrolase {ECO:0000313|EMBL:CBL40989.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25108..25527)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11108.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_543_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25666..26082)
DNA (417bp) protein (139aa)
Uncharacterized domain 1 n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT46_9FIRM
uncharacterized domain 1
Uncharacterized domain 1 {ECO:0000313|EMBL:CBL40988.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26151..26654)
DNA (504bp) protein (168aa)
Uncharacterized conserved protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT45_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL40987.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26636..27697)
DNA (1062bp) protein (354aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621, ECO:0000313|EMBL:CBL40986.1}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
tRNA-dihydrouridine synthase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT44_9FIRM
tRNA-dihydrouridine synthase
L3_079_000M1_scaffold_543_22
unknown

Not on your lists

27701..27952
DNA (252bp) protein (84aa)

This feature has no annotations

L3_079_000M1_scaffold_543_23
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28227..29243
DNA (1017bp) protein (339aa)
[citrate (pro-3S)-lyase] ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:CBL40979.1}; EC=6.2.1.22 {ECO:0000313|EMBL:CBL40979.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
[citrate (Pro-3S)-lyase] ligase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT37_9FIRM
L3_079_000M1_scaffold_543_24
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29544..31049
DNA (1506bp) protein (502aa)
holo-ACP synthase CitX (EC:2.7.8.25)
Holo-ACP synthase CitX {ECO:0000313|EMBL:CBL40978.1}; EC=2.7.8.25 {ECO:0000313|EMBL:CBL40978.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Holo-ACP synthase CitX n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT36_9FIRM
L3_079_000M1_scaffold_543_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31223..31723)
DNA (501bp) protein (167aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT35_9FIRM
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CBL40977.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31860..34169)
DNA (2310bp) protein (770aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:CBL40976.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CBL40976.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT34_9FIRM
L3_079_000M1_scaffold_543_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34166..34648)
DNA (483bp) protein (161aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs {ECO:0000313|EMBL:CBL40975.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CBL40975.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT33_9FIRM
L3_079_000M1_scaffold_543_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34710..35498)
DNA (789bp) protein (263aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT32_9FIRM
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs {ECO:0000313|EMBL:CBL40974.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35693..36799
DNA (1107bp) protein (369aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT31_9FIRM
ABC-type Fe3+-hydroxamate transport system, periplasmic component
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:CBL40973.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_543_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36771..37769
DNA (999bp) protein (333aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT30_9FIRM
ABC-type Fe3+-siderophore transport system, permease component
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:CBL40972.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying items 1-30 of 54 in total

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