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L3_079_000M1_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_545_1
unknown

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_079_000M1_scaffold_545_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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268..1686
DNA (1419bp) protein (473aa)
aspartyl-tRNA synthetase, archaeal type (EC:6.1.1.23)
Aspartate--tRNA ligase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U073_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CCZ64566.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_079_000M1_scaffold_545_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1748..2665
DNA (918bp) protein (306aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFY9_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:CCZ64565.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glutamyl-tRNA(Gln) amidotransferase, C subunit
L3_079_000M1_scaffold_545_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2683..4146
DNA (1464bp) protein (488aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.- 6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P6T2_9FIRM
L3_079_000M1_scaffold_545_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4162..5595
DNA (1434bp) protein (478aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Roseburia sp. CAG:50 RepID=R5TFX3_9FIRM
aspartyl/glutamyl-tRNA amidotransferase subunit B
L3_079_000M1_scaffold_545_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5878..7404
DNA (1527bp) protein (509aa)
ATP-dependent protease ATPase subunit clpX n=1 Tax=Roseburia sp. CAG:50 RepID=R5U686_9FIRM
ATP-dependent protease ATPase subunit clpX {ECO:0000313|EMBL:CCZ64562.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L3_079_000M1_scaffold_545_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8074..8598
DNA (525bp) protein (175aa)
ATP:corrinoid adenosyltransferase n=2 Tax=Clostridiales RepID=R5U395_9FIRM
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:CCZ65616.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
BtuR; ATP:corrinoid adenosyltransferase
L3_079_000M1_scaffold_545_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8616..9656
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PR02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65615.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9653..11179
DNA (1527bp) protein (509aa)
MutS domain V protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QY31_9FIRM
MutS domain V protein {ECO:0000313|EMBL:ERK46213.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_545_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11458..13038)
DNA (1581bp) protein (527aa)
Na+/H+ antiporter NhaC-like protein n=2 Tax=Clostridiales RepID=R5TIU2_9FIRM
Na+/H+ antiporter NhaC-like protein {ECO:0000313|EMBL:CCZ65613.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Na+/H+ antiporter NhaC-like protein
L3_079_000M1_scaffold_545_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13665..14117
DNA (453bp) protein (151aa)
Beta-alanyl-CoA:ammonia lyase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQ02_9FIRM
Beta-alanyl-CoA:ammonia lyase {ECO:0000313|EMBL:ERK46211.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_545_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14318..15259
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2P6S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46210.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_545_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15486..16526
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TIW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65610.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16595..17851
DNA (1257bp) protein (419aa)
Lysine-2 3-aminomutase n=2 Tax=Clostridiales RepID=R5TQP0_9FIRM
Lysine-2 3-aminomutase {ECO:0000313|EMBL:CCZ65609.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_15
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17993..19546
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65608.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19550..20335
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U9G5_9FIRM
B12 binding domain protein {ECO:0000313|EMBL:ERK46206.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_545_17
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20339..21214
DNA (876bp) protein (292aa)
Permease of the drug n=1 Tax=Roseburia sp. CAG:50 RepID=R5U386_9FIRM
Permease of the drug {ECO:0000313|EMBL:CCZ65606.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
RhaT; drug/metabolite transporter superfamily permease
L3_079_000M1_scaffold_545_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21259..22185
DNA (927bp) protein (309aa)
Phenazine biosynthesis protein, PhzF family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQZ2_9FIRM
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ERK46204.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
phenazine biosynthesis protein phzF
L3_079_000M1_scaffold_545_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22336..24024
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65604.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Subtilase family.
L3_079_000M1_scaffold_545_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24351..25766
DNA (1416bp) protein (472aa)
UPF0272 protein CXIVA_23130 n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIT4_9FIRM
UPF0272 protein CXIVA_23130 {ECO:0000313|EMBL:CCZ65603.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_21
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25763..26221
DNA (459bp) protein (153aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Lipoprotein signal peptidase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9G0_9FIRM
peptidase A8 signal peptidase II
L3_079_000M1_scaffold_545_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26214..26720)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46199.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_079_000M1_scaffold_545_23
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26911..28074
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65600.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_24
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28096..29205
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65599.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29366..29686
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TIT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65598.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_079_000M1_scaffold_545_26
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29730..31316
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65597.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted unusual protein kinase
L3_079_000M1_scaffold_545_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31339..31953
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQY4_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted membrane protein
L3_079_000M1_scaffold_545_28
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31981..33264
DNA (1284bp) protein (428aa)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QY15_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:ERK46193.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
O-acetylhomoserine (thiol)-lyase
L3_079_000M1_scaffold_545_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33436..34170)
DNA (735bp) protein (245aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV47_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY33693.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC transporter
L3_079_000M1_scaffold_545_30
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34172..35251)
DNA (1080bp) protein (360aa)
NMT1/THI5-like protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9F0_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CCZ65592.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
NMT1/THI5-like domain-containing protein
Displaying items 1-30 of 52 in total

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