ggKbase home page

L3_079_000M1_scaffold_591

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_591_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

124..612
DNA (489bp) protein (163aa)
Type II secretion system protein G n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I845_9FIRM
Type II secretion system protein G {ECO:0000313|EMBL:CDB46373.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative type IV pilin
L3_079_000M1_scaffold_591_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(699..1523)
DNA (825bp) protein (275aa)
Competence factor n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAQ3_9FIRM
Competence factor {ECO:0000313|EMBL:CDB46375.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
PilE-like protein
L3_079_000M1_scaffold_591_3
unknown

Not on your lists

comp(1655..2170)
DNA (516bp) protein (172aa)

This feature has no annotations

L3_079_000M1_scaffold_591_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2163..2723)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D5T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI92130.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
putative primosome component and related proteins
L3_079_000M1_scaffold_591_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3097..3558)
DNA (462bp) protein (154aa)
Type II secretion system protein G n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7V0_9FIRM
Type II secretion system protein G {ECO:0000313|EMBL:CDB46372.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
L3_079_000M1_scaffold_591_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3695..4909)
DNA (1215bp) protein (405aa)
Type II secretion system protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILV8_9FIRM
Type II secretion system protein {ECO:0000313|EMBL:CDB46371.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Type II secretion system F domain-containing protein
L3_079_000M1_scaffold_591_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4931..5986)
DNA (1056bp) protein (352aa)
Twitching motility protein PilT n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAP6_9FIRM
Twitching motility protein PilT {ECO:0000313|EMBL:CDB46370.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
twitching motility protein
L3_079_000M1_scaffold_591_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5999..7669)
DNA (1671bp) protein (557aa)
General secretory pathway protein E n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6III7_9FIRM
General secretory pathway protein E {ECO:0000313|EMBL:CDB46369.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
type II secretion system protein E
L3_079_000M1_scaffold_591_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7910..8428
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I840_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46368.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_591_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8428..9873
DNA (1446bp) protein (482aa)
Bacterial type II/III secretion system short domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7U5_9FIRM
Bacterial type II/III secretion system short domain protein {ECO:0000313|EMBL:CDB46367.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
type II and III secretion system protein
L3_079_000M1_scaffold_591_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9923..10570)
DNA (648bp) protein (216aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILV3_9FIRM
L3_079_000M1_scaffold_591_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10572..11393)
DNA (822bp) protein (274aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAP0_9FIRM
L3_079_000M1_scaffold_591_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11390..12193)
DNA (804bp) protein (268aa)
Phosphomethylpyrimidine kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIH9_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDB46364.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphomethylpyrimidine kinase
L3_079_000M1_scaffold_591_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12301..14286)
DNA (1986bp) protein (662aa)
transketolase (EC:2.2.1.3)
Transketolase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I836_9FIRM
Transketolase {ECO:0000313|EMBL:CDB46363.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_591_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14714..16060
DNA (1347bp) protein (449aa)
Anaerobic c4-dicarboxylate membrane transporter family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7T9_9FIRM
Anaerobic c4-dicarboxylate membrane transporter family protein {ECO:0000313|EMBL:CDB46362.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
anaerobic c4-dicarboxylate membrane transporter family protein
L3_079_000M1_scaffold_591_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16225..18288)
DNA (2064bp) protein (688aa)
Translation elongation factor G n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILU8_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:CDB46361.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
translation elongation factor G
L3_079_000M1_scaffold_591_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18527..19075)
DNA (549bp) protein (183aa)
NUDIX hydrolase (EC:3.6.1.13)
Hydrolase NUDIX family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAN5_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CDB46360.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_591_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19081..20763)
DNA (1683bp) protein (561aa)
DNA repair protein RecN n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIH5_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA repair protein RecN
L3_079_000M1_scaffold_591_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20784..21230)
DNA (447bp) protein (149aa)
Arginine repressor n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I830_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
arginine repressor, ArgR
L3_079_000M1_scaffold_591_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21272..22138)
DNA (867bp) protein (289aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7T4_9FIRM
ATP-NAD/AcoX kinase
L3_079_000M1_scaffold_591_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22155..22973)
DNA (819bp) protein (273aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILU4_9FIRM
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:CDB46356.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hemolysin A
L3_079_000M1_scaffold_591_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22970..24868)
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAN0_9FIRM
deoxyxylulose-5-phosphate synthase
L3_079_000M1_scaffold_591_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24904..25779)
DNA (876bp) protein (292aa)
polyprenyl synthetase (EC:2.5.1.10 2.5.1.1 2.5.1.29)
Geranyltranstransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIG8_9FIRM
Geranyltranstransferase {ECO:0000313|EMBL:CDB46354.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_079_000M1_scaffold_591_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25781..26035)
DNA (255bp) protein (85aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I824_9FIRM
xseB; exodeoxyribonuclease VII small subunit
L3_079_000M1_scaffold_591_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26032..27246)
DNA (1215bp) protein (405aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7S7_9FIRM
L3_079_000M1_scaffold_591_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(27239..28198)
DNA (960bp) protein (320aa)
Peptidase M22 family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILT9_9FIRM
Peptidase M22 family {ECO:0000313|EMBL:CDB46351.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
peptidase M22 glycoprotease
L3_079_000M1_scaffold_591_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28191..28601)
DNA (411bp) protein (137aa)
N utilization substance protein B homolog n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IAM7_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transcription antitermination factor NusB
L3_079_000M1_scaffold_591_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28625..28852)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IIG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46349.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Protein of unknown function DUF2273
L3_079_000M1_scaffold_591_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28866..29384)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I818_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46348.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_079_000M1_scaffold_591_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29391..29885)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J7S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46347.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy