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L3_079_000M1_scaffold_593

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_593_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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239..1375
DNA (1137bp) protein (379aa)
Putative aminotransferase A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9G5_9ACTN
Putative aminotransferase A {ECO:0000313|EMBL:EBA39910.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aspartate/tyrosine/aromatic aminotransferase
L3_079_000M1_scaffold_593_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1883..2404
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=2 Tax=Collinsella RepID=A4E9G6_9ACTN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
50S ribosomal protein L10P
L3_079_000M1_scaffold_593_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2507..2884
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Collinsella RepID=A4E9G7_9ACTN
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L12
L3_079_000M1_scaffold_593_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3115..4107
DNA (993bp) protein (331aa)
Nucleotidyl transferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9G8_9ACTN
Nucleotidyl transferase {ECO:0000313|EMBL:EBA39913.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
nucleotidyl transferase
L3_079_000M1_scaffold_593_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4395..7886
DNA (3492bp) protein (1164aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1S7_9ACTN
L3_079_000M1_scaffold_593_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7893..12368
DNA (4476bp) protein (1492aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5X4_9ACTN
L3_079_000M1_scaffold_593_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12570..13088
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEY5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35129.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_000M1_scaffold_593_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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13039..14115
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8C6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35130.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000M1_scaffold_593_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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14590..14967
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Collinsella RepID=A4E9H5_9ACTN
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S12P
L3_079_000M1_scaffold_593_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


15041..15514
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=2 Tax=Collinsella RepID=A4E9H6_9ACTN
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S7
L3_079_000M1_scaffold_593_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15534..17633
DNA (2100bp) protein (700aa)
Elongation factor G n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5X8_9ACTN
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
translation elongation factor 2 (EF-2/EF-G)
L3_079_000M1_scaffold_593_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


17695..18003
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Collinsella RepID=R5ZEZ0_9ACTN
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S10P
L3_079_000M1_scaffold_593_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18120..18896)
DNA (777bp) protein (259aa)
birA; biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I0_9ACTN
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:KGI74747.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_593_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19073..20032
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I1_9ACTN
3-oxoacyl-[acyl-carrier-protein] synthase III
L3_079_000M1_scaffold_593_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20084..20320
DNA (237bp) protein (79aa)
Acyl carrier protein n=2 Tax=Collinsella RepID=A4E9I2_9ACTN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
acpP; acyl carrier protein
L3_079_000M1_scaffold_593_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20323..21267
DNA (945bp) protein (315aa)
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EBA39928.1}; EC=1.3.-.- {ECO:0000313|EMBL:EBA39928.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I3_9ACTN
2-nitropropane dioxygenase
L3_079_000M1_scaffold_593_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21255..22181
DNA (927bp) protein (309aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I4_9ACTN
L3_079_000M1_scaffold_593_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22212..22985
DNA (774bp) protein (258aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EBA39930.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EBA39930.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I5_9ACTN
3-oxoacyl-(acyl-carrier-protein) reductase
L3_079_000M1_scaffold_593_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23025..24272
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41 2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I6_9ACTN
L3_079_000M1_scaffold_593_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24276..24749
DNA (474bp) protein (158aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1T9_9ACTN
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:CDA35142.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000M1_scaffold_593_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24759..25181
DNA (423bp) protein (141aa)
fabZ; beta-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC:4.2.1.-)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5Y8_9ACTN
(3R)-hydroxymyristoyl-ACP dehydratase {ECO:0000313|EMBL:CDA35143.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000M1_scaffold_593_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25192..26535
DNA (1344bp) protein (448aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.3.4.14 6.4.1.2)
Putative acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Collinsella RepID=A4E9I9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74738.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_593_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26522..28246
DNA (1725bp) protein (575aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J0_9ACTN
L3_079_000M1_scaffold_593_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28338..29501
DNA (1164bp) protein (388aa)
bglF.3; PTS system beta-glucosides-specific transporter subunit IIBC (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J1_9ACTN
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EBA39936.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_593_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29648..30808
DNA (1161bp) protein (387aa)
Cation diffusion facilitator family transporter n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J2_9ACTN
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EBA39937.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cation diffusion facilitator family transporter
L3_079_000M1_scaffold_593_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30848..31474
DNA (627bp) protein (209aa)
Phosphoglycerate mutase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoglycerate mutase
L3_079_000M1_scaffold_593_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


31942..32553
DNA (612bp) protein (204aa)
50S ribosomal protein L3 n=2 Tax=Collinsella RepID=A4E9J4_9ACTN
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L3
L3_079_000M1_scaffold_593_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


32600..33226
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=2 Tax=Collinsella RepID=A4E9J5_9ACTN
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L4
L3_079_000M1_scaffold_593_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


33227..33508
DNA (282bp) protein (94aa)
50S ribosomal protein L23 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8E0_9ACTN
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L23
L3_079_000M1_scaffold_593_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


33661..34524
DNA (864bp) protein (288aa)
50S ribosomal protein L2 n=2 Tax=Collinsella RepID=A4E9J7_9ACTN
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L2
Displaying items 1-30 of 53 in total

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