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L3_079_000M1_scaffold_599

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_599_1
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

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comp(1..462)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R7Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28977.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
hypothetical protein
L3_079_000M1_scaffold_599_2
unknown

Not on your lists

559..756
DNA (198bp) protein (66aa)

This feature has no annotations

L3_079_000M1_scaffold_599_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(902..3310)
DNA (2409bp) protein (803aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=2 Tax=Oscillibacter RepID=U2QMK3_9FIRM
L3_079_000M1_scaffold_599_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3329..4762)
DNA (1434bp) protein (478aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SL68_9FIRM
L3_079_000M1_scaffold_599_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4793..5905)
DNA (1113bp) protein (371aa)
glgD; glycogen biosynthesis protein GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=2 Tax=Oscillibacter RepID=U2R2P5_9FIRM
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:ERK64027.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_599_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5902..7110)
DNA (1209bp) protein (403aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CWZ6_9FIRM
L3_079_000M1_scaffold_599_7
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7146..9074)
DNA (1929bp) protein (643aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
glgB; 1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TFU6_9FIRM
L3_079_000M1_scaffold_599_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9123..10346)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H204_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27476.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_079_000M1_scaffold_599_9

Not on your lists

comp(10347..10598)
DNA (252bp) protein (84aa)
Protein containing DUF896, bacterial n=1 Tax=human gut metagenome RepID=K1SZB7_9ZZZZ
Protein containing DUF896, bacterial {ECO:0000313|EMBL:EKC60734.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_000M1_scaffold_599_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(10612..11403)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S056_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46433.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_599_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(11400..13154)
DNA (1755bp) protein (585aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXB4_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CCX72508.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative ABC transporter permease/ATP-binding protein
L3_079_000M1_scaffold_599_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(13276..14001)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46432.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
alpha-L-fucosidase
L3_079_000M1_scaffold_599_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

14550..14810
DNA (261bp) protein (87aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SI79_9FIRM
L3_079_000M1_scaffold_599_14
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15079..15684)
DNA (606bp) protein (202aa)
Putative chromate transporter n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TE33_9FIRM
Putative chromate transporter {ECO:0000313|EMBL:CDC67959.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative chromate transporter
L3_079_000M1_scaffold_599_15
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15681..16226)
DNA (546bp) protein (182aa)
Putative chromate transporter n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T6X0_9FIRM
Putative chromate transporter {ECO:0000313|EMBL:CDC67960.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative chromate transporter
L3_079_000M1_scaffold_599_16
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16239..17240)
DNA (1002bp) protein (334aa)
birA; transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T3H7_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_079_000M1_scaffold_599_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17513..18898
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46302.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Predicted membrane protein involved in D-alanine export
L3_079_000M1_scaffold_599_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

18910..19770
DNA (861bp) protein (287aa)
GDSL-family lipase/acylhydrolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZR5_9FIRM
GDSL-family lipase/acylhydrolase {ECO:0000313|EMBL:CCZ46303.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_599_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(19965..21752)
DNA (1788bp) protein (596aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYD4_9FIRM
L3_079_000M1_scaffold_599_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists


comp(21977..22837)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SLK2_9FIRM
L3_079_000M1_scaffold_599_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

22936..23742
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45811.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_599_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(23793..25151)
DNA (1359bp) protein (453aa)
UPF0210 protein BN483_00592 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SF20_9FIRM
UPF0210 protein BN483_00592 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_599_23
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25170..25439)
DNA (270bp) protein (90aa)
UPF0237 protein N510_01626 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFN9_9FIRM
ACT domain-containing protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_079_000M1_scaffold_599_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(25566..26585)
DNA (1020bp) protein (340aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RX67_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CCZ45810.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative hydrolase
L3_079_000M1_scaffold_599_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27275..29119)
DNA (1845bp) protein (615aa)
UvrABC system protein C n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S668_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
uvrC; UvrABC system protein C
L3_079_000M1_scaffold_599_26
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29242..29505)
DNA (264bp) protein (88aa)
HPr-like protein Crh n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6USY0_9FIRM
HPr-like protein Crh {ECO:0000313|EMBL:CDC73832.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
crh; HPr-like protein Crh
L3_079_000M1_scaffold_599_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29647..32028)
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Endonuclease MutS2 n=2 Tax=Oscillibacter RepID=U2QB76_9FIRM
mutS2; MutS2 protein
L3_079_000M1_scaffold_599_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(32083..32841)
DNA (759bp) protein (253aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZW3_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
recO; DNA repair protein RecO
L3_079_000M1_scaffold_599_29
unknown

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comp(33792..33980)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_079_000M1_scaffold_599_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(33992..34888)
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RY43_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
era; GTP-binding protein Era
Displaying items 1-30 of 44 in total

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