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L3_079_000M1_scaffold_604

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_604_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..3536)
DNA (3534bp) protein (1178aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Alistipes sp. HGB5 RepID=E4MEL5_9BACT
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
L3_079_000M1_scaffold_604_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4325..5563
DNA (1239bp) protein (413aa)
Putative Zn-dependent peptidase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7Z2_9BACT
Putative Zn-dependent peptidase {ECO:0000313|EMBL:CDD24816.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Zn-dependent peptidase
L3_079_000M1_scaffold_604_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5560..6825
DNA (1266bp) protein (422aa)
Peptidase M16 inactive domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XT33_9BACT
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD24815.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Zn-dependent peptidase
L3_079_000M1_scaffold_604_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7009..8013)
DNA (1005bp) protein (335aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0L1_9BACT
dimethyladenosine transferase
L3_079_000M1_scaffold_604_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8006..8224)
DNA (219bp) protein (73aa)
Acetyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XME1_9BACT
Acetyltransferase {ECO:0000313|EMBL:CDD24813.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase
L3_079_000M1_scaffold_604_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8221..8409)
DNA (189bp) protein (63aa)
Acetyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XME1_9BACT
Acetyltransferase {ECO:0000313|EMBL:CDD24813.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_604_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8473..8712)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2V1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24812.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8714..8899)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7Y6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24811.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8912..9130)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XT29_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24810.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9205..11397)
DNA (2193bp) protein (731aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0K5_9BACT
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDD24809.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ATP-dependent DNA helicase RecQ
L3_079_000M1_scaffold_604_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11498..12319
DNA (822bp) protein (274aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036DB1B0
ABC-type (Unclassified) transport system ATPase component {ECO:0000313|EMBL:CDD24808.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ABC transporter ATPase
L3_079_000M1_scaffold_604_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12386..13630
DNA (1245bp) protein (415aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2U7_9BACT
L3_079_000M1_scaffold_604_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13636..14613
DNA (978bp) protein (326aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7Y0_9BACT
L3_079_000M1_scaffold_604_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14613..15512
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000364B106
protein-(glutamine-N5) methyltransferase
Protein-(Glutamine-N5) methyltransferase release factor-specific {ECO:0000313|EMBL:CCZ75256.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_079_000M1_scaffold_604_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15494..16006
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y0K0_9BACT
Regulatory protein RecX {ECO:0000313|EMBL:CDD24804.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15991..17718
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003618CDE
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL76585.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_079_000M1_scaffold_604_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17777..18163
DNA (387bp) protein (129aa)
chemotaxis protein CheY n=1 Tax=Alistipes onderdonkii RepID=UPI00037CDE31
Putative polar-differentiation response regulator DivK {ECO:0000313|EMBL:CDD24323.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
CheY-like receiver domain-containing protein
L3_079_000M1_scaffold_604_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18256..20343
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1H4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24322.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
two-component system sensor histidine kinase
L3_079_000M1_scaffold_604_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20340..21653
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6N3_9BACT
two-component system sensor histidine kinase
L3_079_000M1_scaffold_604_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22005..25145
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRQ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24320.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25159..26568
DNA (1410bp) protein (470aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ38_9BACT
L-arabinose isomerase
L3_079_000M1_scaffold_604_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26574..27473)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003660E47
Uncharacterized protein {ECO:0000313|EMBL:CDD24318.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_079_000M1_scaffold_604_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28024..28578
DNA (555bp) protein (185aa)
30S ribosomal protein S16 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1H0_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
30S ribosomal protein S16
L3_079_000M1_scaffold_604_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28831..29361
DNA (531bp) protein (177aa)
Ribosome maturation factor RimM n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6M9_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
16S rRNA processing protein RimM
L3_079_000M1_scaffold_604_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29376..30677
DNA (1302bp) protein (434aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP7_9BACT
L3_079_000M1_scaffold_604_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31358..31597
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ33_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24314.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31607..32560
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036F9268
Uncharacterized protein {ECO:0000313|EMBL:CDD24313.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32732..35461
DNA (2730bp) protein (910aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1G6_9BACT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDD24312.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_604_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35650..36138
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6M4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24311.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_604_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36441..36971
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24310.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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