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L3_079_000M1_scaffold_607

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_607_1
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..361
DNA (360bp) protein (120aa)
30S ribosomal protein S1 n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89ZN2_BACTN
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CDE78551.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_607_2
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

448..1416
DNA (969bp) protein (323aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKA1_9BACE
L3_079_000M1_scaffold_607_3
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1403..1954
DNA (552bp) protein (184aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=Q89ZN0_BACTN
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDE78553.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_079_000M1_scaffold_607_4
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2002..2388
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK99_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68342.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_607_5
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2415..2882
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6IK98_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68341.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_607_6
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3034..3822)
DNA (789bp) protein (263aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
MazG family protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK97_9BACE
MazG family protein {ECO:0000313|EMBL:EES68340.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_7
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3927..4991)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68339.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_607_8
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5086..5724
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZM5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES68338.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_9
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5789..8428
DNA (2640bp) protein (880aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK94_9BACE
L3_079_000M1_scaffold_607_10
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8545..10440
DNA (1896bp) protein (632aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK93_9BACE
two-component system sensor histidine kinase
L3_079_000M1_scaffold_607_11
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10830..11405)
DNA (576bp) protein (192aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Bacteroides RepID=Q89ZM2_BACTN
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EES68335.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11536..12564
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IK91_9BACE
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:AAO79461.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_607_13
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12725..16261
DNA (3537bp) protein (1179aa)
SusC homolog n=2 Tax=Bacteroides RepID=Q89ZM0_BACTN
hypothetical protein
SusC homolog {ECO:0000313|EMBL:AAO79462.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_607_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16296..18182
DNA (1887bp) protein (629aa)
SusD homolog n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89ZL9_BACTN
SusD homolog {ECO:0000313|EMBL:AAO79463.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L3_079_000M1_scaffold_607_15
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18442..20652
DNA (2211bp) protein (737aa)
Alpha-N-acetylglucosaminidase n=2 Tax=Bacteroides RepID=Q89ZL8_BACTN
Uncharacterized protein {ECO:0000313|EMBL:EES68331.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
alpha-N-acetylglucosaminidase
L3_079_000M1_scaffold_607_16
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21104..21550)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IK87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68330.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_607_17
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21612..22721)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZL6_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79466.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_607_18
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22843..26163)
DNA (3321bp) protein (1107aa)
Protein translocase subunit SecA n=2 Tax=Bacteroides RepID=SECA_BACTN
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_19
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26294..27868)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6IK84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68327.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
alkaline phosphatase
L3_079_000M1_scaffold_607_20
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27868..29055)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZL3_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES68326.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_21
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29498..30229
DNA (732bp) protein (244aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-Rule:MF_01274}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Type III pantothenate kinase n=2 Tax=Bacteroides RepID=COAX_BACTN
L3_079_000M1_scaffold_607_22
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30216..31511
DNA (1296bp) protein (432aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6IK81_9BACE
hypothetical protein
Putative outer membrane protein {ECO:0000313|EMBL:AAO79472.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_607_23
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31567..32892
DNA (1326bp) protein (442aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q89ZK9_BACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS00473.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_079_000M1_scaffold_607_24
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32898..33551
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6V6B3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE78597.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L3_079_000M1_scaffold_607_25
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33555..34811
DNA (1257bp) protein (419aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6IK78_9BACE
hemolysin
CBS domain protein {ECO:0000313|EMBL:EFI06515.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_079_000M1_scaffold_607_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34931..37069
DNA (2139bp) protein (713aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides RepID=Q89ZK6_BACTN
Uncharacterized protein {ECO:0000313|EMBL:EES68320.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
peptidyl-prolyl cis-trans isomerase
L3_079_000M1_scaffold_607_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37208..38245
DNA (1038bp) protein (346aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Bacteroides RepID=RLMN_BACTN
ribosomal RNA large subunit methyltransferase N
L3_079_000M1_scaffold_607_28
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38263..39300
DNA (1038bp) protein (346aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IK75_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES68318.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_000M1_scaffold_607_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39305..40399
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=5 Tax=Bacteroides RepID=PDXA_BACTN
4-hydroxythreonine-4-phosphate dehydrogenase
L3_079_000M1_scaffold_607_30
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40523..41764
DNA (1242bp) protein (414aa)
Transcriptional regulator n=5 Tax=Bacteroides RepID=Q89ZK2_BACTN
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EES68316.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Displaying items 1-30 of 32 in total

View Taxonomy