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L3_079_000M1_scaffold_621

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_621_1
unknown

Not on your lists

2..82
DNA (81bp) protein (27aa)

This feature has no annotations

L3_079_000M1_scaffold_621_2
unknown

Not on your lists

82..303
DNA (222bp) protein (74aa)

This feature has no annotations

L3_079_000M1_scaffold_621_3
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1144..1407)
DNA (264bp) protein (88aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Histophilus somni (strain 2336) RepID=B0UTM4_HISS2
addiction module antitoxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:ACA30866.1}; TaxID=228400 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source="Histophilus somni (strain 2336) (Haemophilus somnus).;"
L3_079_000M1_scaffold_621_4
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1407..1655)
DNA (249bp) protein (83aa)
Addiction module antitoxin, Axe family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y4E7_9FIRM
hypothetical protein
Addiction module antitoxin, Axe family {ECO:0000313|EMBL:ESL03818.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
L3_079_000M1_scaffold_621_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1873..2733)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74318.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3684..5555)
DNA (1872bp) protein (624aa)
TraG/TraD family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSN0_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EFB74316.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_621_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5571..7820)
DNA (2250bp) protein (750aa)
DEAD/DEAH box helicase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM9_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFB74315.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
N-6 DNA methylase
L3_079_000M1_scaffold_621_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8105..9628)
DNA (1524bp) protein (508aa)
group II intron reverse transcriptase/maturase (EC:2.7.7.49)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZM0_RUMGN
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EDN78881.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_079_000M1_scaffold_621_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10129..14967)
DNA (4839bp) protein (1613aa)
DEAD/DEAH box helicase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM9_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFB74315.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA methylase
L3_079_000M1_scaffold_621_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15074..15733)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74314.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15927..17291)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74313.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_621_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17457..17978)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74311.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18174..19490)
DNA (1317bp) protein (439aa)
Peptidase, M23 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM4_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EFB74310.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
peptidase M23
L3_079_000M1_scaffold_621_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19493..22129)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74309.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_621_15
unknown

Not on your lists

comp(22263..23231)
DNA (969bp) protein (323aa)

This feature has no annotations

L3_079_000M1_scaffold_621_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23331..24191)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74308.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24254..24529)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74307.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24570..25574)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74306.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA primase
L3_079_000M1_scaffold_621_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25619..31663)
DNA (6045bp) protein (2015aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74305.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_20
unknown

Not on your lists

comp(31755..31997)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_079_000M1_scaffold_621_21
unknown

Not on your lists

32130..32846
DNA (717bp) protein (239aa)

This feature has no annotations

L3_079_000M1_scaffold_621_22
unknown

Not on your lists

comp(32839..33549)
DNA (711bp) protein (237aa)

This feature has no annotations

L3_079_000M1_scaffold_621_23
unknown

Not on your lists

comp(33503..33679)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_079_000M1_scaffold_621_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33735..34037)
DNA (303bp) protein (101aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD2_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EFB75394.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative regulatory protein
L3_079_000M1_scaffold_621_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34097..35377)
DNA (1281bp) protein (427aa)
SCP-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL7_9FIRM
SCP-like protein {ECO:0000313|EMBL:EFB74303.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Ig domain protein group 2 domain protein
L3_079_000M1_scaffold_621_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35374..36132)
DNA (759bp) protein (253aa)
Putative sortase, SrtB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL6_9FIRM
Putative sortase, SrtB family {ECO:0000313|EMBL:EFB74302.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
sortase
L3_079_000M1_scaffold_621_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36159..36437)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74301.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_621_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36415..37389)
DNA (975bp) protein (325aa)
ParB-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL4_9FIRM
ParB-like protein {ECO:0000313|EMBL:EFB74300.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ParB-like partition proteins
L3_079_000M1_scaffold_621_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37393..38142)
DNA (750bp) protein (250aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL3_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFB74299.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Soj; chromosome partitioning ATPase
L3_079_000M1_scaffold_621_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38184..38591)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74296.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 1-30 of 37 in total

View Taxonomy