ggKbase home page

L3_079_000M1_scaffold_646

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_646_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

215..1189
DNA (975bp) protein (325aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFQ08464.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFQ08464.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE6_9FIRM
hypothetical protein
L3_079_000M1_scaffold_646_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1278..2210)
DNA (933bp) protein (311aa)
Oligopeptide ABC transporter, ATP-binding protein OppF n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE5_9FIRM
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EFQ08463.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_079_000M1_scaffold_646_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2211..3308)
DNA (1098bp) protein (366aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ08462.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_079_000M1_scaffold_646_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3322..4425)
DNA (1104bp) protein (368aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ08461.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_079_000M1_scaffold_646_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4427..5362)
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ08460.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_079_000M1_scaffold_646_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5526..7223)
DNA (1698bp) protein (566aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEE1_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ08459.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type oligopeptide transport system, periplasmic component
L3_079_000M1_scaffold_646_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7654..8172)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08457.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_646_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8285..9859)
DNA (1575bp) protein (525aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Ribonuclease Y n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED8_9FIRM
conserved hypothetical protein YmdA/YtgF
L3_079_000M1_scaffold_646_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10241..12007)
DNA (1767bp) protein (589aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EFQ08454.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulator
L3_079_000M1_scaffold_646_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12133..12861)
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED5_9FIRM
L3_079_000M1_scaffold_646_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13093..13974)
DNA (882bp) protein (294aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EFQ08451.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFQ08451.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED3_9FIRM
L3_079_000M1_scaffold_646_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13988..14656)
DNA (669bp) protein (223aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EFQ08450.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFQ08450.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED2_9FIRM
L3_079_000M1_scaffold_646_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14696..15337)
DNA (642bp) protein (214aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED1_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFQ08449.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Na+/H+-dicarboxylate symporters
L3_079_000M1_scaffold_646_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15334..15774)
DNA (441bp) protein (147aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED1_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFQ08449.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Na+/H+-dicarboxylate symporters
L3_079_000M1_scaffold_646_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15984..16877
DNA (894bp) protein (298aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED0_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EFQ08448.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulator
L3_079_000M1_scaffold_646_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17001..18356)
DNA (1356bp) protein (452aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG82_9FIRM
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:EFQ07806.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
gluconate transporter
L3_079_000M1_scaffold_646_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18564..20351)
DNA (1788bp) protein (596aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Putative dihydroxy-acid dehydratase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG84_9FIRM
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:EFQ07808.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_646_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20657..21364)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG86_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ07810.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, GntR family
L3_079_000M1_scaffold_646_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21465..22982)
DNA (1518bp) protein (506aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG87_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFQ07811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid carrier protein
L3_079_000M1_scaffold_646_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23414..23596)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07813.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_000M1_scaffold_646_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23673..24587
DNA (915bp) protein (305aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07814.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_646_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24494..25930)
DNA (1437bp) protein (479aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM6_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ08047.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, GntR family
L3_079_000M1_scaffold_646_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26071..26799
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08046.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted membrane protein
L3_079_000M1_scaffold_646_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27117..27965)
DNA (849bp) protein (283aa)
Methyltransferase domain. (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ08045.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_646_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27962..29878)
DNA (1917bp) protein (639aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM3_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFQ08044.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_646_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29892..31184)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08043.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_000M1_scaffold_646_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31218..32297)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08042.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_000M1_scaffold_646_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32322..32933)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08041.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L3_079_000M1_scaffold_646_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32930..33652)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08040.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L3_079_000M1_scaffold_646_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33649..34668)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08039.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
Displaying items 1-30 of 48 in total

View Taxonomy