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L3_079_000M1_scaffold_647

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_647_1
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(358..1686)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UR67_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51972.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Two-component sensor histidine kinase
L3_079_000M1_scaffold_647_2
unknown

Not on your lists

comp(2130..2360)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_079_000M1_scaffold_647_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2448..3908
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F1P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98748.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
PAS/PAC sensor-containing diguanylate cyclase
L3_079_000M1_scaffold_647_4
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4669..5874
DNA (1206bp) protein (402aa)
Integrase family protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JQY2_DESFR
Integrase family protein {ECO:0000313|EMBL:EFL52983.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
phage integrase site specific recombinase
L3_079_000M1_scaffold_647_5
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5883..6191)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y5F8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44925.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_079_000M1_scaffold_647_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..7579)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UWI9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50019.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
capsule polysaccharide biosynthesis
L3_079_000M1_scaffold_647_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7573..7935)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UWI9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50019.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
capsule polysaccharide biosynthesis
L3_079_000M1_scaffold_647_8
unknown

Not on your lists

comp(8242..8988)
DNA (747bp) protein (249aa)

This feature has no annotations

L3_079_000M1_scaffold_647_9
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(9045..10277)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z7D4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFC91381.1}; Flags: Precursor;; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
L3_079_000M1_scaffold_647_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10313..11839)
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKK7_CLOSC
Protein of unknown function (DUF3137).
Uncharacterized protein {ECO:0000313|EMBL:CBK78231.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000M1_scaffold_647_11
unknown

Not on your lists

comp(12022..12720)
DNA (699bp) protein (233aa)

This feature has no annotations

L3_079_000M1_scaffold_647_12
unknown

Not on your lists

comp(12815..13348)
DNA (534bp) protein (178aa)

This feature has no annotations

L3_079_000M1_scaffold_647_13
Mycoplasma sp. CAG:877, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13381..13929)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5M2F3_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CCY79367.1}; TaxID=1262907 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:877.;"
LemA family protein
L3_079_000M1_scaffold_647_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13981..14364)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QFL5_METSZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ06386.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
L3_079_000M1_scaffold_647_15
unknown

Not on your lists

comp(14387..14731)
DNA (345bp) protein (115aa)

This feature has no annotations

L3_079_000M1_scaffold_647_16
unknown

Not on your lists

comp(14697..15905)
DNA (1209bp) protein (403aa)

This feature has no annotations

L3_079_000M1_scaffold_647_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16054..18525
DNA (2472bp) protein (824aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0J7_CLOSW
LuxR family ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ADL06430.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_079_000M1_scaffold_647_18
unknown

Not on your lists

18987..19094
DNA (108bp) protein (36aa)

This feature has no annotations

L3_079_000M1_scaffold_647_19
unknown

Not on your lists

19691..20029
DNA (339bp) protein (113aa)

This feature has no annotations

L3_079_000M1_scaffold_647_20
unknown

Not on your lists

20087..20248
DNA (162bp) protein (54aa)

This feature has no annotations

L3_079_000M1_scaffold_647_21
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20490..20615)
DNA (126bp) protein (42aa)
transposase n=2 Tax=Desulfovibrio desulfuricans RepID=UPI0003B752D0
transposase family protein
Transposase {ECO:0000313|EMBL:EAY68583.1}; Transposase family protein {ECO:0000313|EMBL:AJY09770.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
L3_079_000M1_scaffold_647_22
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20602..20754)
DNA (153bp) protein (51aa)
transposase n=2 Tax=Desulfovibrio desulfuricans RepID=UPI0003B752D0
transposase family protein
Transposase {ECO:0000313|EMBL:EAY70758.1}; Transposase family protein {ECO:0000313|EMBL:AJY12820.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
L3_079_000M1_scaffold_647_23
unknown

Not on your lists

comp(20787..20903)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_079_000M1_scaffold_647_24
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20906..21100)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4D6_9BURK
cobQ/CobB/MinD/ParA nucleotide binding domain protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:AIO35382.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
L3_079_000M1_scaffold_647_25
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..21420)
DNA (354bp) protein (118aa)
Mobilization protein, MobD n=1 Tax=Pseudomonas putida (strain DOT-T1E) RepID=G0WPD2_PSEPT
Protein mobD {ECO:0000313|EMBL:ESW36975.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
hypothetical protein
L3_079_000M1_scaffold_647_26
unknown

Not on your lists

comp(21594..21758)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_079_000M1_scaffold_647_27
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21959..22333
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V761_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43818.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_079_000M1_scaffold_647_28
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22299..24554
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V760_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43817.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
mobilization protein
L3_079_000M1_scaffold_647_29
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

24631..24990
DNA (360bp) protein (120aa)
Protein of hypothetical function DUF891 id=3095388 bin=GWC2_Clostridiales_40_7 species=Centipeda periodontii genus=Centipeda taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=GWC2_Clostridiales_40_7_curated
L3_079_000M1_scaffold_647_30
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24992..25276
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24R89_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE85453.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
Displaying items 1-30 of 64 in total

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