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L3_079_000M1_scaffold_648

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_648_1
unknown

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comp(2..70)
DNA (69bp) protein (23aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
L3_079_000M1_scaffold_648_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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574..1074
DNA (501bp) protein (167aa)
Transcriptional regulators n=2 Tax=Clostridiales RepID=D7GPU0_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL42825.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_3
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1272..3176
DNA (1905bp) protein (635aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Clostridium sp. CAG:81 RepID=R5FXV3_9CLOT
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCY09678.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_648_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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3245..5041
DNA (1797bp) protein (599aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT8_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL42823.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5250..5486
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GB11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09676.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_648_6
unknown

Not on your lists

5503..5592
DNA (90bp) protein (30aa)

This feature has no annotations

L3_079_000M1_scaffold_648_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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6065..7498
DNA (1434bp) protein (478aa)
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571, ECO:0000313|EMBL:CBL42821.1};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Proline--tRNA ligase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT6_9FIRM
L3_079_000M1_scaffold_648_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7498..8064
DNA (567bp) protein (189aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1C3_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY09674.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_079_000M1_scaffold_648_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8107..9327
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5FXU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY09673.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
tRNA nucleotidyltransferase/poly(A) polymerase
L3_079_000M1_scaffold_648_10
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9623..10678
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42819.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_11
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10816..11325
DNA (510bp) protein (170aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1B9_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
transcriptional regulator NrdR
L3_079_000M1_scaffold_648_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11389..11922
DNA (534bp) protein (178aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT2_9FIRM
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 {ECO:0000313|EMBL:CBL42817.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12025..12582
DNA (558bp) protein (186aa)
Elongation factor P n=2 Tax=Clostridiales RepID=D7GPT1_9FIRM
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_14
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13016..14398
DNA (1383bp) protein (461aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1B5_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Mg2+ transporter (mgtE)
L3_079_000M1_scaffold_648_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14463..15920
DNA (1458bp) protein (486aa)
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000313|EMBL:CBL42815.1};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Glutamate--tRNA ligase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT0_9FIRM
L3_079_000M1_scaffold_648_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16028..17998
DNA (1971bp) protein (657aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPS9_9FIRM
L3_079_000M1_scaffold_648_17
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18106..18636
DNA (531bp) protein (177aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CBL42813.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CBL42813.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPS8_9FIRM
L3_079_000M1_scaffold_648_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18804..19139
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FXT4_9CLOT
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:CCY09653.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_648_19
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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19931..20677
DNA (747bp) protein (249aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N2Q8_9FIRM
Bile acid 7-dehydroxylase 1/3 {ECO:0000313|EMBL:CDF07749.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L3_079_000M1_scaffold_648_20
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

20771..20992
DNA (222bp) protein (74aa)
Thioredoxin n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N6N2_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
thioredoxin
L3_079_000M1_scaffold_648_21
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(21121..22407)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07402.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_079_000M1_scaffold_648_22
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(22432..23724)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N4C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07401.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Predicted signal transduction protein with a C-terminal ATPase domain
L3_079_000M1_scaffold_648_23
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(23714..24664)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07400.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
response regulator of the LytR/AlgR family
L3_079_000M1_scaffold_648_24
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24743..34138
DNA (9396bp) protein (3132aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K883_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39682.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_079_000M1_scaffold_648_25
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(34235..34717)
DNA (483bp) protein (161aa)
Putative two-component system response regulator n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N7Q9_9FIRM
Putative two-component system response regulator {ECO:0000313|EMBL:CDF08132.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
putative two-component system response regulator
L3_079_000M1_scaffold_648_26
unknown

Not on your lists

34733..34906
DNA (174bp) protein (58aa)

This feature has no annotations

L3_079_000M1_scaffold_648_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34944..35186
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR41_9FIRM
Integrase {ECO:0000313|EMBL:KJF38276.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Site-specific recombinase XerD
L3_079_000M1_scaffold_648_28
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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35193..35774
DNA (582bp) protein (194aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWT4_9FIRM
Integrase {ECO:0000313|EMBL:KKG40297.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
L3_079_000M1_scaffold_648_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35871..36968
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=2 Tax=Clostridiales RepID=D7GPS6_9FIRM
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_079_000M1_scaffold_648_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37206..38081
DNA (876bp) protein (292aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPS5_9FIRM
Displaying items 1-30 of 53 in total

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