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L3_079_000M1_scaffold_663

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_663_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3..389
DNA (387bp) protein (129aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z837_9ACTN
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDA35853.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L3_079_000M1_scaffold_663_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(492..1463)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73090.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
L3_079_000M1_scaffold_663_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1624..2469
DNA (846bp) protein (282aa)
ABC-2 type transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNB0_9ACTN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_079_000M1_scaffold_663_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2481..3248
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE6_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA38677.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_079_000M1_scaffold_663_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3421..3921)
DNA (501bp) protein (167aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
3-dehydroquinate dehydratase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE7_9ACTN
dehydroquinase class II
L3_079_000M1_scaffold_663_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3986..5236)
DNA (1251bp) protein (417aa)
Shikimate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73085.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
shikimate kinase
L3_079_000M1_scaffold_663_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5237..6382)
DNA (1146bp) protein (382aa)
Chorismate mutase (EC:5.4.99.5)
Prephenate dehydratase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAH6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73084.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_663_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6436..7533)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Chorismate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGX7_9ACTN
chorismate synthase
L3_079_000M1_scaffold_663_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7535..8854)
DNA (1320bp) protein (440aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECF1_9ACTN
3-phosphoshikimate 1-carboxyvinyltransferase
L3_079_000M1_scaffold_663_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8848..9954)
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3X5_9ACTN
L3_079_000M1_scaffold_663_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9991..10905)
DNA (915bp) protein (305aa)
Prephenate dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNA1_9ACTN
Prephenate dehydrogenase {ECO:0000313|EMBL:CDA35841.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
prephenate dehydrogenase
L3_079_000M1_scaffold_663_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10909..11931)
DNA (1023bp) protein (341aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAH1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73079.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_663_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12147..13607)
DNA (1461bp) protein (487aa)
Resolvase, N-terminal domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8C7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71991.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_663_14
unknown

Not on your lists

comp(13707..14069)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_079_000M1_scaffold_663_15
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14143..14364)
DNA (222bp) protein (74aa)
Cro/C1-type HTH DNA-binding domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2T191_9ACTN
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:ERL06814.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
L3_079_000M1_scaffold_663_16
unknown

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14503..14706
DNA (204bp) protein (68aa)

This feature has no annotations

L3_079_000M1_scaffold_663_17
unknown

Not on your lists

14681..14815
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_000M1_scaffold_663_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14812..15165
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8D8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71996.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_663_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15222..15503
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI71997.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_663_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15496..15834
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI71998.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_663_21
Mycobacterium phage Carcharodon, Caudovirales, Viruses

Not on your lists

15827..16195
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Mycobacterium phage Butters RepID=M4W8N6_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AIT14557.1}; TaxID=1555233 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage Carcharodon.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_663_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16198..16410
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI72001.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_663_23
unknown

Not on your lists

16410..16631
DNA (222bp) protein (74aa)

This feature has no annotations

L3_079_000M1_scaffold_663_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16631..17611
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8E4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72002.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_663_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17615..18184
DNA (570bp) protein (190aa)
Erf family protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VTR9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72003.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_663_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18188..18535
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WLU2_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI72004.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_663_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18536..19072
DNA (537bp) protein (179aa)
Single-stranded DNA-binding protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F284_9ACTN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
single-strand binding protein
L3_079_000M1_scaffold_663_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19072..19182
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7B2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40621.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_663_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19182..20054
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7B1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40620.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_663_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20051..20503
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8F1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72008.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying items 1-30 of 62 in total

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